Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 AC023347.2-201ENST00000433994 462 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 NMNAT1P2-201ENST00000435192 860 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 RPS26P40-201ENST00000435209 294 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 RPS26P2-201ENST00000440331 348 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 TXNP5-201ENST00000441043 315 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN1BQ07699 AC073109.1-201ENST00000445066 978 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AC105399.1-202ENST00000447303 205 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 RPL31P15-201ENST00000449770 338 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AL672138.1-201ENST00000450604 1015 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 RANP1-206ENST00000455094 651 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 RN7SL189P-201ENST00000468631 289 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN1BQ07699 OR5H4P-201ENST00000510851 923 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN1BQ07699 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN1BQ07699 NRBF2P4-201ENST00000520874 850 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
SCN1BQ07699 AC005341.1-201ENST00000571086 708 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AC010547.6-201ENST00000571789 193 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 RN7SL176P-201ENST00000580352 264 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 RN7SL708P-201ENST00000580952 299 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.52□□□□□ -1.69
SCN1BQ07699 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN1BQ07699 AC087283.1-201ENST00000604029 1074 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 AC007204.2-201ENST00000615022 616 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 uc_338.18-201ENST00000615451 175 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 AP000843.1-201ENST00000624880 701 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN1BQ07699 MIR6715B-201ENST00000637172 77 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN1BQ07699 AC017104.5-201ENST00000637647 639 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SCN1BQ07699 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 Z73965.1-201ENST00000623412 2297 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SCN1BQ07699 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.52□□□□□ -1.69
SCN1BQ07699 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN1BQ07699 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SCN1BQ07699 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.51□□□□□ -1.69
SCN1BQ07699 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AL672167.1-205ENST00000641112 3080 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 MIR105-1-201ENST00000385222 81 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.51□□□□□ -1.69
SCN1BQ07699 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AC009237.10-201ENST00000414112 510 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 SRSF1P1-201ENST00000424058 520 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AL390119.1-201ENST00000440329 312 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 PCNPP2-201ENST00000441651 455 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 HMGN1P36-201ENST00000446623 298 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.51□□□□□ -1.69
SCN1BQ07699 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 AC079168.1-201ENST00000458741 345 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 AC084754.1-201ENST00000463466 464 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.51□□□□□ -1.69
SCN1BQ07699 HMGB1P44-201ENST00000508597 572 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.51□□□□□ -1.69
SCN1BQ07699 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AC027544.3-201ENST00000535082 757 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AL161713.1-201ENST00000555538 145 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.51□□□□□ -1.69
SCN1BQ07699 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.51□□□□□ -1.69
SCN1BQ07699 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.51□□□□□ -1.69
SCN1BQ07699 RN7SL622P-201ENST00000585292 275 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 AC067852.4-201ENST00000590314 478 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.51□□□□□ -1.69
SCN1BQ07699 FO393422.1-201ENST00000603908 708 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 AL162431.4-201ENST00000604674 411 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.51□□□□□ -1.69
SCN1BQ07699 CU639417.4-201ENST00000623928 207 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.51□□□□□ -1.69
SCN1BQ07699 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.51□□□□□ -1.69
SCN1BQ07699 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SCN1BQ07699 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SCN1BQ07699 LINC01109-201ENST00000603837 3081 ntBASIC4.51□□□□□ -1.69
SCN1BQ07699 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCN1BQ07699 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms