Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS1Q01581 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS1Q01581 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS1Q01581 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS1Q01581 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS1Q01581 AL078604.1-201ENST00000404609 466 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 ARAFP1-201ENST00000422172 605 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 AP001324.1-201ENST00000428553 399 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 RPEP2-201ENST00000432149 701 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 AL359265.2-201ENST00000434367 631 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 CEACAMP6-201ENST00000452007 574 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 AL513533.1-201ENST00000453728 415 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC010326.1-201ENST00000462726 602 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 RPS27AP17-201ENST00000463344 455 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS1Q01581 RPS23P1-201ENST00000491662 432 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC008897.1-201ENST00000494006 347 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC063949.1-201ENST00000552900 865 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 RN7SL690P-201ENST00000582087 240 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC087283.1-201ENST00000604029 1074 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 Z98200.1-201ENST00000607298 470 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 AL353600.1-201ENST00000608148 251 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC073342.3-201ENST00000624211 193 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC006065.6-201ENST00000625201 545 ntBASIC4.29□□□□□ -1.72
HMGCS1Q01581 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGCS1Q01581 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS1Q01581 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGCS1Q01581 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS1Q01581 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AC067945.1-201ENST00000342609 618 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS1Q01581 RNA5SP307-201ENST00000362863 116 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 RNA5SP146-201ENST00000410743 123 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AL590139.1-201ENST00000416267 400 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 NPM1P26-201ENST00000426339 738 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AC073264.2-201ENST00000448886 166 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 MTCYBP14-201ENST00000457471 715 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 STMN1P2-201ENST00000508435 439 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 AC008694.2-201ENST00000517591 306 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AP001781.1-201ENST00000530977 207 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS1Q01581 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGCS1Q01581 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AC055839.1-201ENST00000634467 498 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS1Q01581 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS1Q01581 AC012618.3-205ENST00000637896 1496 ntBASIC4.28□□□□□ -1.72
HMGCS1Q01581 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS1Q01581 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGCS1Q01581 MTCO1P22-201ENST00000604619 1360 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS1Q01581 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS1Q01581 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 LINC01109-201ENST00000603837 3081 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS1Q01581 AC079741.1-201ENST00000321498 212 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS1Q01581 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 RNA5SP397-201ENST00000391323 118 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 SDHCP2-201ENST00000398565 501 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 AL049697.2-201ENST00000403708 294 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 RPS20P14-201ENST00000412545 360 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 SNRPFP1-201ENST00000414761 252 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 AC019050.1-201ENST00000418508 492 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms