Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 MIR1178-201ENST00000408396 91 ntBASIC3.99□□□□□ -1.77
ACTBP60709 RN7SKP213-201ENST00000410746 298 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AL160275.2-201ENST00000412010 394 ntBASIC3.99□□□□□ -1.77
ACTBP60709 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.99□□□□□ -1.77
ACTBP60709 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.99□□□□□ -1.77
ACTBP60709 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.99□□□□□ -1.77
ACTBP60709 AC093162.1-201ENST00000419682 124 ntBASIC3.99□□□□□ -1.77
ACTBP60709 OR6K4P-201ENST00000423179 955 ntBASIC3.99□□□□□ -1.77
ACTBP60709 SKP1P3-201ENST00000429280 487 ntBASIC3.99□□□□□ -1.77
ACTBP60709 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.99□□□□□ -1.77
ACTBP60709 AC092647.3-201ENST00000443044 633 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.99□□□□□ -1.77
ACTBP60709 AC010469.1-201ENST00000463864 576 ntBASIC3.99□□□□□ -1.77
ACTBP60709 RN7SL319P-201ENST00000480656 221 ntBASIC3.99□□□□□ -1.77
ACTBP60709 RPSAP50-201ENST00000481955 852 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AC093270.2-201ENST00000486157 792 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AC111000.5-201ENST00000506559 1178 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.99□□□□□ -1.77
ACTBP60709 AC006499.6-201ENST00000511169 607 ntBASIC3.99□□□□□ -1.77
ACTBP60709 RN7SKP147-201ENST00000517154 244 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.99□□□□□ -1.77
ACTBP60709 AC013701.1-201ENST00000522657 465 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ACTBP60709 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.99□□□□□ -1.77
ACTBP60709 AL352979.3-201ENST00000553515 247 ntBASIC3.99□□□□□ -1.77
ACTBP60709 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.99□□□□□ -1.77
ACTBP60709 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ACTBP60709 AC093249.4-201ENST00000564755 259 ntBASIC3.99□□□□□ -1.77
ACTBP60709 MIR4691-201ENST00000583764 85 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.99□□□□□ -1.77
ACTBP60709 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 AC010680.3-201ENST00000604215 520 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AC013244.1-201ENST00000604279 193 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AL139286.1-201ENST00000604465 483 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AL627230.1-201ENST00000613077 211 ntBASIC3.99□□□□□ -1.77
ACTBP60709 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AL022401.1-201ENST00000619498 108 ntBASIC3.99□□□□□ -1.77
ACTBP60709 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ACTBP60709 AC000123.2-201ENST00000623124 461 ntBASIC3.99□□□□□ -1.77
ACTBP60709 CR381572.2-201ENST00000624852 397 ntBASIC3.99□□□□□ -1.77
ACTBP60709 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ACTBP60709 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.98□□□□□ -1.77
ACTBP60709 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
ACTBP60709 AC006971.1-201ENST00000407916 4486 ntBASIC3.98□□□□□ -1.77
ACTBP60709 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
ACTBP60709 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
ACTBP60709 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ACTBP60709 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ACTBP60709 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ACTBP60709 RNA5SP507-201ENST00000363603 121 ntBASIC3.98□□□□□ -1.77
ACTBP60709 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 RNU1-44P-201ENST00000384453 163 ntBASIC3.98□□□□□ -1.77
ACTBP60709 AL590762.2-201ENST00000395798 571 ntBASIC3.98□□□□□ -1.77
ACTBP60709 DPPA2P3-201ENST00000411853 655 ntBASIC3.98□□□□□ -1.77
ACTBP60709 GJA6P-201ENST00000415117 1042 ntBASIC3.98□□□□□ -1.77
ACTBP60709 BMS1P13-201ENST00000417301 885 ntBASIC3.98□□□□□ -1.77
ACTBP60709 AF186996.5-201ENST00000418098 904 ntBASIC3.98□□□□□ -1.77
ACTBP60709 BX510359.3-201ENST00000422168 306 ntBASIC3.98□□□□□ -1.77
ACTBP60709 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.98□□□□□ -1.77
ACTBP60709 RPS27AP15-201ENST00000447672 466 ntBASIC3.98□□□□□ -1.77
ACTBP60709 AC073850.1-201ENST00000449243 255 ntBASIC3.98□□□□□ -1.77
ACTBP60709 HMGB3P21-201ENST00000452483 547 ntBASIC3.98□□□□□ -1.77
ACTBP60709 BX284632.1-201ENST00000478218 541 ntBASIC3.98□□□□□ -1.77
ACTBP60709 METTL15P1-201ENST00000481421 1045 ntBASIC3.98□□□□□ -1.77
ACTBP60709 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.98□□□□□ -1.77
ACTBP60709 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.98□□□□□ -1.77
ACTBP60709 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 AC093763.2-201ENST00000505334 1223 ntBASIC3.98□□□□□ -1.77
ACTBP60709 AC147055.3-201ENST00000510547 851 ntBASIC3.98□□□□□ -1.77
ACTBP60709 AC015795.1-201ENST00000513669 327 ntBASIC3.98□□□□□ -1.77
ACTBP60709 NPM1P52-201ENST00000518264 846 ntBASIC3.98□□□□□ -1.77
ACTBP60709 NPM1P35-201ENST00000533043 868 ntBASIC3.98□□□□□ -1.77
ACTBP60709 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ACTBP60709 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.98□□□□□ -1.77
ACTBP60709 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.98□□□□□ -1.77
ACTBP60709 AC051619.2-201ENST00000559063 397 ntBASIC3.98□□□□□ -1.77
ACTBP60709 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.98□□□□□ -1.77
ACTBP60709 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.98□□□□□ -1.77
ACTBP60709 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTBP60709 AL138721.1-201ENST00000616756 179 ntBASIC3.98□□□□□ -1.77
ACTBP60709 RMST_9.1-201ENST00000619945 193 ntBASIC3.98□□□□□ -1.77
ACTBP60709 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.98□□□□□ -1.77
ACTBP60709 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.98□□□□□ -1.77
ACTBP60709 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.98□□□□□ -1.77
ACTBP60709 AC009452.1-201ENST00000640823 606 ntBASIC3.98□□□□□ -1.77
ACTBP60709 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.98□□□□□ -1.77
ACTBP60709 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
ACTBP60709 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ACTBP60709 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms