Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HDAC4P56524 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.26□□□□□ -1.57
HDAC4P56524 CASC19-261ENST00000641853 1638 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.26□□□□□ -1.57
HDAC4P56524 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HDAC4P56524 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDAC4P56524 MTND5P11-201ENST00000511037 1812 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDAC4P56524 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.25□□□□□ -1.57
HDAC4P56524 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.25□□□□□ -1.57
HDAC4P56524 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDAC4P56524 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HDAC4P56524 DDX18P3-201ENST00000404856 2007 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.25□□□□□ -1.57
HDAC4P56524 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.25□□□□□ -1.57
HDAC4P56524 AC017079.1-201ENST00000333650 415 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDAC4P56524 RNU6-225P-201ENST00000384613 103 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 ATP5HP3-201ENST00000396994 486 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 AC013442.1-201ENST00000397347 228 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 AL024507.1-201ENST00000412741 274 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.25□□□□□ -1.57
HDAC4P56524 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.25□□□□□ -1.57
HDAC4P56524 AL772161.1-201ENST00000439130 476 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 AL450023.3-201ENST00000440592 271 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.25□□□□□ -1.57
HDAC4P56524 AL354714.3-201ENST00000447284 493 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.25□□□□□ -1.57
HDAC4P56524 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HDAC4P56524 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.25□□□□□ -1.57
HDAC4P56524 TCEA1P1-201ENST00000449716 880 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 HMGB1P4-201ENST00000455362 567 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDAC4P56524 RPS17P2-201ENST00000461663 408 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.25□□□□□ -1.57
HDAC4P56524 AC107398.1-201ENST00000486904 505 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 HMGN2P25-201ENST00000486956 268 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.25□□□□□ -1.57
HDAC4P56524 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.25□□□□□ -1.57
HDAC4P56524 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.25□□□□□ -1.57
HDAC4P56524 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.25□□□□□ -1.57
HDAC4P56524 TPT1P8-201ENST00000510120 555 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.25□□□□□ -1.57
HDAC4P56524 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDAC4P56524 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.25□□□□□ -1.57
HDAC4P56524 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.25□□□□□ -1.57
HDAC4P56524 GLRXP2-201ENST00000555594 321 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.25□□□□□ -1.57
HDAC4P56524 AL158211.1-201ENST00000566763 763 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.25□□□□□ -1.57
HDAC4P56524 AC068620.3-201ENST00000602749 560 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 AC023762.1-201ENST00000603280 584 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.25□□□□□ -1.57
HDAC4P56524 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.25□□□□□ -1.57
HDAC4P56524 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.25□□□□□ -1.57
HDAC4P56524 AC004808.1-201ENST00000627671 721 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.25□□□□□ -1.57
HDAC4P56524 AC099654.8-201ENST00000637757 681 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HDAC4P56524 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HDAC4P56524 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDAC4P56524 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HDAC4P56524 THAP12P4-201ENST00000528321 2266 ntBASIC5.25□□□□□ -1.57
HDAC4P56524 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HDAC4P56524 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDAC4P56524 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.24□□□□□ -1.57
HDAC4P56524 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.24□□□□□ -1.57
HDAC4P56524 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDAC4P56524 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HDAC4P56524 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HDAC4P56524 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDAC4P56524 RNU6-666P-201ENST00000363499 107 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 SNORA72.3-201ENST00000365074 132 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HDAC4P56524 RNU6-1000P-201ENST00000391066 106 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 RPL22P22-201ENST00000395439 379 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AL158825.1-201ENST00000414735 521 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 BX664727.1-201ENST00000416024 466 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HDAC4P56524 AC012519.1-201ENST00000424588 610 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AL645931.1-201ENST00000439737 410 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.24□□□□□ -1.57
HDAC4P56524 HMGB1P5-202ENST00000451497 985 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AC243772.1-201ENST00000451620 410 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AL691482.1-201ENST00000453255 87 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.24□□□□□ -1.57
HDAC4P56524 NDUFA5P12-201ENST00000503796 343 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 RNU5A-7P-201ENST00000515979 116 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms