Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
CLTCL1P53675 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CLTCL1P53675 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.09□□□□□ -1.43
CLTCL1P53675 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLTCL1P53675 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.09□□□□□ -1.43
CLTCL1P53675 SNORD96B-201ENST00000386148 79 ntBASIC6.09□□□□□ -1.43
CLTCL1P53675 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.09□□□□□ -1.43
CLTCL1P53675 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.09□□□□□ -1.43
CLTCL1P53675 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.09□□□□□ -1.43
CLTCL1P53675 LINC01881-201ENST00000416103 412 ntBASIC6.09□□□□□ -1.43
CLTCL1P53675 AL121878.1-201ENST00000418638 859 ntBASIC6.09□□□□□ -1.43
CLTCL1P53675 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.09□□□□□ -1.43
CLTCL1P53675 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.09□□□□□ -1.43
CLTCL1P53675 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.09□□□□□ -1.43
CLTCL1P53675 AC027455.1-201ENST00000574104 594 ntBASIC6.09□□□□□ -1.43
CLTCL1P53675 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.09□□□□□ -1.43
CLTCL1P53675 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.09□□□□□ -1.43
CLTCL1P53675 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.09□□□□□ -1.43
CLTCL1P53675 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
CLTCL1P53675 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CLTCL1P53675 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CLTCL1P53675 AL133268.1-201ENST00000405676 1401 ntBASIC6.09□□□□□ -1.44
CLTCL1P53675 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CLTCL1P53675 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CLTCL1P53675 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLTCL1P53675 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLTCL1P53675 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLTCL1P53675 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CLTCL1P53675 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.08□□□□□ -1.44
CLTCL1P53675 RPL17P50-201ENST00000396131 546 ntBASIC6.08□□□□□ -1.44
CLTCL1P53675 CEACAMP1-201ENST00000434624 1035 ntBASIC6.08□□□□□ -1.44
CLTCL1P53675 AL445433.1-201ENST00000457507 257 ntBASIC6.08□□□□□ -1.44
CLTCL1P53675 USP9YP2-201ENST00000504503 1000 ntBASIC6.08□□□□□ -1.44
CLTCL1P53675 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.08□□□□□ -1.44
CLTCL1P53675 USP9YP1-201ENST00000513521 1002 ntBASIC6.08□□□□□ -1.44
CLTCL1P53675 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.08□□□□□ -1.44
CLTCL1P53675 AC006064.5-201ENST00000541782 248 ntBASIC6.08□□□□□ -1.44
CLTCL1P53675 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CLTCL1P53675 AC053481.4-201ENST00000583164 216 ntBASIC6.08□□□□□ -1.44
CLTCL1P53675 RN7SL435P-201ENST00000584418 282 ntBASIC6.08□□□□□ -1.44
CLTCL1P53675 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.08□□□□□ -1.44
CLTCL1P53675 AC005086.4-201ENST00000623065 213 ntBASIC6.08□□□□□ -1.44
CLTCL1P53675 AC112484.5-201ENST00000624189 228 ntBASIC6.08□□□□□ -1.44
CLTCL1P53675 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLTCL1P53675 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLTCL1P53675 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.08□□□□□ -1.44
CLTCL1P53675 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLTCL1P53675 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.08□□□□□ -1.44
CLTCL1P53675 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLTCL1P53675 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CLTCL1P53675 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLTCL1P53675 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLTCL1P53675 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLTCL1P53675 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLTCL1P53675 AP000357.1-201ENST00000409926 1165 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.07□□□□□ -1.44
CLTCL1P53675 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLTCL1P53675 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.07□□□□□ -1.44
CLTCL1P53675 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.07□□□□□ -1.44
CLTCL1P53675 ABCF2P2-201ENST00000450549 296 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 AC146944.2-203ENST00000502493 354 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 AC139495.1-202ENST00000513164 354 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 NDUFB4P12-201ENST00000513465 390 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.07□□□□□ -1.44
CLTCL1P53675 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.07□□□□□ -1.44
CLTCL1P53675 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.07□□□□□ -1.44
CLTCL1P53675 AC012442.3-202ENST00000636742 206 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.07□□□□□ -1.44
CLTCL1P53675 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLTCL1P53675 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
CLTCL1P53675 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLTCL1P53675 MAPK10-349ENST00000641767 3661 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.07□□□□□ -1.44
CLTCL1P53675 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLTCL1P53675 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
CLTCL1P53675 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLTCL1P53675 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.07□□□□□ -1.44
CLTCL1P53675 snoU13.22-201ENST00000459428 104 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 RN7SL132P-201ENST00000478131 296 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC6.07□□□□□ -1.44
CLTCL1P53675 AC008966.2-201ENST00000606157 453 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.07□□□□□ -1.44
CLTCL1P53675 AC010608.2-201ENST00000624830 470 ntBASIC6.07□□□□□ -1.44
CLTCL1P53675 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLTCL1P53675 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
CLTCL1P53675 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLTCL1P53675 HSPD1P14-201ENST00000432666 1618 ntBASIC6.06□□□□□ -1.44
CLTCL1P53675 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLTCL1P53675 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.06□□□□□ -1.44
CLTCL1P53675 AC017104.4-201ENST00000636283 1592 ntBASIC6.06□□□□□ -1.44
CLTCL1P53675 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLTCL1P53675 SNORA70.4-201ENST00000365509 134 ntBASIC6.06□□□□□ -1.44
CLTCL1P53675 AL078604.1-201ENST00000404609 466 ntBASIC6.06□□□□□ -1.44
CLTCL1P53675 AC091959.2-201ENST00000477363 321 ntBASIC6.06□□□□□ -1.44
CLTCL1P53675 AC138938.1-201ENST00000515431 782 ntBASIC6.06□□□□□ -1.44
CLTCL1P53675 RNU6-352P-201ENST00000516908 107 ntBASIC6.06□□□□□ -1.44
CLTCL1P53675 AGGF1P6-201ENST00000569213 976 ntBASIC6.06□□□□□ -1.44
CLTCL1P53675 MIR3158-1-201ENST00000583596 81 ntBASIC6.06□□□□□ -1.44
CLTCL1P53675 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC6.06□□□□□ -1.44
CLTCL1P53675 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms