Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.02□□□□□ -1.61
LIMK1P53667 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK1P53667 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK1P53667 RNA5SP43-201ENST00000516559 110 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK1P53667 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK1P53667 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK1P53667 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK1P53667 AC084757.1-201ENST00000559987 490 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.02□□□□□ -1.61
LIMK1P53667 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 MIR4715-201ENST00000584117 79 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.02□□□□□ -1.61
LIMK1P53667 AC017076.1-201ENST00000607613 578 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 AC025016.1-201ENST00000616746 682 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 AC009318.3-201ENST00000616916 503 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.02□□□□□ -1.61
LIMK1P53667 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.02□□□□□ -1.61
LIMK1P53667 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LIMK1P53667 AC073869.8-201ENST00000641806 335 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LIMK1P53667 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
LIMK1P53667 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.02□□□□□ -1.61
LIMK1P53667 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 AC068870.1-201ENST00000563737 2455 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
LIMK1P53667 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 AP001002.1-201ENST00000625148 1513 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK1P53667 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
LIMK1P53667 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
LIMK1P53667 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.01□□□□□ -1.61
LIMK1P53667 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LIMK1P53667 Y_RNA.110-201ENST00000363220 99 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 RNU6-532P-201ENST00000384318 107 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 AL021331.1-201ENST00000402817 582 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.01□□□□□ -1.61
LIMK1P53667 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.01□□□□□ -1.61
LIMK1P53667 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.01□□□□□ -1.61
LIMK1P53667 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK1P53667 OR7E125P-201ENST00000443450 846 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.01□□□□□ -1.61
LIMK1P53667 RNU7-27P-201ENST00000459281 62 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 AC092691.2-201ENST00000461787 803 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 AC091180.1-201ENST00000462104 372 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 RN7SL41P-201ENST00000476144 297 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 RN7SL319P-201ENST00000480656 221 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 AC005912.1-201ENST00000495392 255 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 ENPP7P9-201ENST00000514456 627 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 AC090819.1-201ENST00000523800 1111 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.01□□□□□ -1.61
LIMK1P53667 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.01□□□□□ -1.61
LIMK1P53667 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK1P53667 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK1P53667 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LIMK1P53667 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.01□□□□□ -1.61
LIMK1P53667 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.01□□□□□ -1.61
LIMK1P53667 AC233266.2-201ENST00000567067 528 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.01□□□□□ -1.61
LIMK1P53667 AC127024.5-201ENST00000580085 462 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 AC233702.9-201ENST00000581528 203 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.01□□□□□ -1.61
LIMK1P53667 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.01□□□□□ -1.61
LIMK1P53667 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.01□□□□□ -1.61
LIMK1P53667 AL671309.1-201ENST00000603750 544 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 SUMO2P14-201ENST00000604488 293 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 AL356218.2-201ENST00000605264 187 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 MIR1264-201ENST00000616374 69 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 AL118496.1-201ENST00000440201 1812 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 AL592182.3-201ENST00000642132 3304 ntBASIC5.01□□□□□ -1.61
LIMK1P53667 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LIMK1P53667 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.01□□□□□ -1.61
LIMK1P53667 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK1P53667 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK1P53667 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LIMK1P53667 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK1P53667 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 AL731532.2-201ENST00000623542 1953 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC007382.1-201ENST00000624376 2618 ntBASIC5□□□□□ -1.61
LIMK1P53667 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms