Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 DNAJC19P1-201ENST00000455312 319 ntBASIC6.75□□□□□ -1.33
USP11P51784 MTND6P6-201ENST00000478031 263 ntBASIC6.75□□□□□ -1.33
USP11P51784 CR383656.1-201ENST00000484916 377 ntBASIC6.75□□□□□ -1.33
USP11P51784 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.75□□□□□ -1.33
USP11P51784 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.75□□□□□ -1.33
USP11P51784 ARL2BPP6-201ENST00000512757 439 ntBASIC6.75□□□□□ -1.33
USP11P51784 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.75□□□□□ -1.33
USP11P51784 RNU6-875P-201ENST00000516488 106 ntBASIC6.75□□□□□ -1.33
USP11P51784 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.75□□□□□ -1.33
USP11P51784 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.75□□□□□ -1.33
USP11P51784 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.75□□□□□ -1.33
USP11P51784 PCNAP4-201ENST00000532690 730 ntBASIC6.75□□□□□ -1.33
USP11P51784 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USP11P51784 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
USP11P51784 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
USP11P51784 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.75□□□□□ -1.33
USP11P51784 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.75□□□□□ -1.33
USP11P51784 AL021918.2-201ENST00000613415 194 ntBASIC6.75□□□□□ -1.33
USP11P51784 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
USP11P51784 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
USP11P51784 FAM157B-203ENST00000639350 358 ntBASIC6.75□□□□□ -1.33
USP11P51784 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.75□□□□□ -1.33
USP11P51784 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.75□□□□□ -1.33
USP11P51784 AC130304.1-201ENST00000622942 2385 ntBASIC6.75□□□□□ -1.33
USP11P51784 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
USP11P51784 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
USP11P51784 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USP11P51784 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
USP11P51784 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 AC017104.4-201ENST00000636283 1592 ntBASIC6.74□□□□□ -1.33
USP11P51784 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
USP11P51784 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 TMSB4XP4-201ENST00000323496 618 ntBASIC6.74□□□□□ -1.33
USP11P51784 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 RPL23AP59-201ENST00000399415 461 ntBASIC6.74□□□□□ -1.33
USP11P51784 RPL23AP17-201ENST00000401064 499 ntBASIC6.74□□□□□ -1.33
USP11P51784 RNU2-65P-201ENST00000410162 185 ntBASIC6.74□□□□□ -1.33
USP11P51784 RPS15AP38-201ENST00000413110 372 ntBASIC6.74□□□□□ -1.33
USP11P51784 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.74□□□□□ -1.33
USP11P51784 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.74□□□□□ -1.33
USP11P51784 MTCYBP24-201ENST00000420387 1106 ntBASIC6.74□□□□□ -1.33
USP11P51784 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.74□□□□□ -1.33
USP11P51784 GTF2IP23-201ENST00000423746 351 ntBASIC6.74□□□□□ -1.33
USP11P51784 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.74□□□□□ -1.33
USP11P51784 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.74□□□□□ -1.33
USP11P51784 DEFA9P-201ENST00000433042 285 ntBASIC6.74□□□□□ -1.33
USP11P51784 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.74□□□□□ -1.33
USP11P51784 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.74□□□□□ -1.33
USP11P51784 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.74□□□□□ -1.33
USP11P51784 AL591363.1-201ENST00000450091 483 ntBASIC6.74□□□□□ -1.33
USP11P51784 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.74□□□□□ -1.33
USP11P51784 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.74□□□□□ -1.33
USP11P51784 KLF3P2-201ENST00000465138 268 ntBASIC6.74□□□□□ -1.33
USP11P51784 AC146507.1-201ENST00000468335 354 ntBASIC6.74□□□□□ -1.33
USP11P51784 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.74□□□□□ -1.33
USP11P51784 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 AL365503.1-201ENST00000605247 905 ntBASIC6.74□□□□□ -1.33
USP11P51784 AC091304.9-201ENST00000612091 226 ntBASIC6.74□□□□□ -1.33
USP11P51784 AL445670.1-201ENST00000618889 801 ntBASIC6.74□□□□□ -1.33
USP11P51784 FER-210ENST00000628534 558 ntTSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 AC129915.3-201ENST00000634128 948 ntBASIC6.74□□□□□ -1.33
USP11P51784 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.74□□□□□ -1.33
USP11P51784 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
USP11P51784 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
USP11P51784 AC006600.2-201ENST00000624834 2506 ntBASIC6.74□□□□□ -1.33
USP11P51784 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
USP11P51784 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.73□□□□□ -1.33
USP11P51784 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.73□□□□□ -1.33
USP11P51784 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USP11P51784 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USP11P51784 AC138393.1-206ENST00000540997 1886 ntBASIC6.73□□□□□ -1.33
USP11P51784 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
USP11P51784 SNORD1C-201ENST00000363315 78 ntBASIC6.73□□□□□ -1.33
USP11P51784 RN7SKP269-201ENST00000365545 319 ntBASIC6.73□□□□□ -1.33
USP11P51784 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
USP11P51784 MIR1203-201ENST00000408812 85 ntBASIC6.73□□□□□ -1.33
USP11P51784 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.73□□□□□ -1.33
USP11P51784 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USP11P51784 AL035660.1-201ENST00000422041 222 ntBASIC6.73□□□□□ -1.33
USP11P51784 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.73□□□□□ -1.33
USP11P51784 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.73□□□□□ -1.33
USP11P51784 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.73□□□□□ -1.33
USP11P51784 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms