Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.29□□□□□ -1.72
RFC3P40938 ARL4AP3-201ENST00000441452 574 ntBASIC4.29□□□□□ -1.72
RFC3P40938 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.29□□□□□ -1.72
RFC3P40938 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.29□□□□□ -1.72
RFC3P40938 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.29□□□□□ -1.72
RFC3P40938 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.29□□□□□ -1.72
RFC3P40938 RN7SL517P-201ENST00000462240 305 ntBASIC4.29□□□□□ -1.72
RFC3P40938 AC037198.2-201ENST00000478845 733 ntBASIC4.29□□□□□ -1.72
RFC3P40938 AC013356.1-201ENST00000489027 564 ntBASIC4.29□□□□□ -1.72
RFC3P40938 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.29□□□□□ -1.72
RFC3P40938 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.29□□□□□ -1.72
RFC3P40938 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.29□□□□□ -1.72
RFC3P40938 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
RFC3P40938 RPL12P25-202ENST00000598100 674 ntBASIC4.29□□□□□ -1.72
RFC3P40938 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.29□□□□□ -1.72
RFC3P40938 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.29□□□□□ -1.72
RFC3P40938 AC067931.1-201ENST00000624190 671 ntBASIC4.29□□□□□ -1.72
RFC3P40938 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RFC3P40938 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFC3P40938 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFC3P40938 AC139713.2-214ENST00000642059 1811 ntBASIC4.29□□□□□ -1.72
RFC3P40938 KARSP3-201ENST00000571212 1504 ntBASIC4.29□□□□□ -1.72
RFC3P40938 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.29□□□□□ -1.72
RFC3P40938 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.29□□□□□ -1.72
RFC3P40938 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.29□□□□□ -1.72
RFC3P40938 DHX40P1-201ENST00000588725 1412 ntBASIC4.29□□□□□ -1.72
RFC3P40938 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.28□□□□□ -1.72
RFC3P40938 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 OR4K15-201ENST00000305051 1216 ntBASIC4.28□□□□□ -1.72
RFC3P40938 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RFC3P40938 RPS3AP23-201ENST00000401762 784 ntBASIC4.28□□□□□ -1.72
RFC3P40938 AL160275.2-201ENST00000412010 394 ntBASIC4.28□□□□□ -1.72
RFC3P40938 AC140479.3-201ENST00000418944 1126 ntBASIC4.28□□□□□ -1.72
RFC3P40938 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.28□□□□□ -1.72
RFC3P40938 RCC2P2-201ENST00000422174 918 ntBASIC4.28□□□□□ -1.72
RFC3P40938 RGS17P1-201ENST00000423358 553 ntBASIC4.28□□□□□ -1.72
RFC3P40938 MTND4LP13-201ENST00000425022 298 ntBASIC4.28□□□□□ -1.72
RFC3P40938 RPL18P10-201ENST00000425606 538 ntBASIC4.28□□□□□ -1.72
RFC3P40938 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.28□□□□□ -1.72
RFC3P40938 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 PTMAP3-201ENST00000447474 330 ntBASIC4.28□□□□□ -1.72
RFC3P40938 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC3P40938 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC3P40938 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC3P40938 AC005008.1-201ENST00000456151 612 ntBASIC4.28□□□□□ -1.72
RFC3P40938 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC3P40938 AC108751.2-201ENST00000469993 231 ntBASIC4.28□□□□□ -1.72
RFC3P40938 AC022336.1-201ENST00000475510 337 ntBASIC4.28□□□□□ -1.72
RFC3P40938 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC3P40938 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RFC3P40938 AP001781.1-201ENST00000530977 207 ntBASIC4.28□□□□□ -1.72
RFC3P40938 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.28□□□□□ -1.72
RFC3P40938 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.28□□□□□ -1.72
RFC3P40938 AC087477.6-201ENST00000559595 843 ntBASIC4.28□□□□□ -1.72
RFC3P40938 MIR4277-201ENST00000578298 84 ntBASIC4.28□□□□□ -1.72
RFC3P40938 MIR4697-201ENST00000582977 78 ntBASIC4.28□□□□□ -1.72
RFC3P40938 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.28□□□□□ -1.72
RFC3P40938 NF1P10-201ENST00000613227 742 ntBASIC4.28□□□□□ -1.72
RFC3P40938 AL121873.1-201ENST00000616013 524 ntBASIC4.28□□□□□ -1.72
RFC3P40938 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.28□□□□□ -1.72
RFC3P40938 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RFC3P40938 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RFC3P40938 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.28□□□□□ -1.72
RFC3P40938 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RFC3P40938 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFC3P40938 AL137100.1-201ENST00000556703 1620 ntBASIC4.28□□□□□ -1.72
RFC3P40938 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.28□□□□□ -1.72
RFC3P40938 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RFC3P40938 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC3P40938 AL133243.3-201ENST00000617415 3004 ntBASIC4.27□□□□□ -1.73
RFC3P40938 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC3P40938 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RFC3P40938 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.27□□□□□ -1.73
RFC3P40938 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFC3P40938 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC3P40938 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.27□□□□□ -1.73
RFC3P40938 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC3P40938 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RFC3P40938 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC3P40938 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC3P40938 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC3P40938 FAM3C2-201ENST00000312214 681 ntBASIC4.27□□□□□ -1.73
RFC3P40938 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RFC3P40938 MIR365B-201ENST00000362317 111 ntBASIC4.27□□□□□ -1.73
RFC3P40938 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.27□□□□□ -1.73
RFC3P40938 SNORD113.2-201ENST00000364166 89 ntBASIC4.27□□□□□ -1.73
RFC3P40938 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.27□□□□□ -1.73
RFC3P40938 AC093084.1-201ENST00000424233 687 ntBASIC4.27□□□□□ -1.73
RFC3P40938 RPL23AP1-201ENST00000428990 471 ntBASIC4.27□□□□□ -1.73
RFC3P40938 BTG3P1-201ENST00000435859 716 ntBASIC4.27□□□□□ -1.73
RFC3P40938 AC073143.1-201ENST00000436316 395 ntBASIC4.27□□□□□ -1.73
RFC3P40938 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms