Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 STIL-202ENST00000360380 5225 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 PCK1-201ENST00000319441 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC9.25□□□□□ -0.93
HOXD11P31277 ELP3-202ENST00000380353 3078 ntTSL 2 BASIC9.25□□□□□ -0.93
HOXD11P31277 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC9.25□□□□□ -0.93
HOXD11P31277 SNORA72.2-201ENST00000365028 127 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 AC068538.1-201ENST00000376856 336 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 RNU6-588P-201ENST00000410281 105 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC9.25□□□□□ -0.93
HOXD11P31277 CHIAP1-201ENST00000456220 995 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 RN7SL776P-201ENST00000493390 268 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC9.25□□□□□ -0.93
HOXD11P31277 GAPDHP31-201ENST00000509325 1014 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 RNA5SP165-201ENST00000517142 115 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC9.25□□□□□ -0.93
HOXD11P31277 AC138466.2-201ENST00000540993 304 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 AL358913.1-201ENST00000554342 121 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC9.25□□□□□ -0.93
HOXD11P31277 FAM238B-204ENST00000612040 423 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 SCARNA4-201ENST00000629045 128 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC9.25□□□□□ -0.93
HOXD11P31277 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC9.25□□□□□ -0.93
HOXD11P31277 TRIP12-203ENST00000389044 6405 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
HOXD11P31277 THAP12P1-201ENST00000398672 2203 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 AC026362.2-201ENST00000624878 5566 ntBASIC9.25□□□□□ -0.93
HOXD11P31277 C11orf49-202ENST00000378615 1651 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 MAB21L3-201ENST00000369500 3229 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
HOXD11P31277 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
HOXD11P31277 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
HOXD11P31277 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 USP13-203ENST00000496897 2747 ntTSL 2 BASIC9.25□□□□□ -0.93
HOXD11P31277 NOS2-202ENST00000621962 3345 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
HOXD11P31277 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC9.24□□□□□ -0.93
HOXD11P31277 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC9.24□□□□□ -0.93
HOXD11P31277 AC006213.2-201ENST00000587128 2193 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 GRIA1-202ENST00000340592 3170 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC9.24□□□□□ -0.93
HOXD11P31277 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 IST1-208ENST00000535424 4082 ntTSL 5 BASIC9.24□□□□□ -0.93
HOXD11P31277 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC9.24□□□□□ -0.93
HOXD11P31277 BTN2A2-203ENST00000416795 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 AKNAD1-201ENST00000369994 2318 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
HOXD11P31277 ACOX2-202ENST00000459701 2348 ntTSL 5 BASIC9.24□□□□□ -0.93
HOXD11P31277 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 PRYP4-201ENST00000306589 444 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
HOXD11P31277 RNU6-1243P-201ENST00000364028 107 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 MIR32-201ENST00000384965 70 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 AL589763.1-201ENST00000412257 791 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 AL714022.1-201ENST00000439897 151 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 AC096638.1-201ENST00000444678 216 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 AP006222.1-205ENST00000450734 457 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 AC002553.3-201ENST00000453002 341 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 RPL23AP45-201ENST00000476406 468 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC9.24□□□□□ -0.93
HOXD11P31277 RN7SKP12-201ENST00000516275 143 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 RNU6-1146P-201ENST00000516282 102 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC9.24□□□□□ -0.93
HOXD11P31277 CNR1-206ENST00000549890 2122 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
HOXD11P31277 IGHV1OR15-4-201ENST00000560037 348 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 AC009139.1-201ENST00000561672 652 ntTSL 2 BASIC9.24□□□□□ -0.93
HOXD11P31277 AC013565.2-201ENST00000564874 310 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC9.24□□□□□ -0.93
HOXD11P31277 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 AL356052.1-201ENST00000605764 376 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 PRYP3-202ENST00000607210 444 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC9.24□□□□□ -0.93
HOXD11P31277 AC134981.1-201ENST00000628076 348 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 AC108724.2-201ENST00000634593 290 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 AL136360.1-201ENST00000503377 1900 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 ARNTL-204ENST00000403482 2389 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC9.24□□□□□ -0.93
HOXD11P31277 GAREM1-202ENST00000399218 7033 ntAPPRIS P3 TSL 2 BASIC9.24□□□□□ -0.93
HOXD11P31277 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 SALL4P7-201ENST00000555779 3120 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
HOXD11P31277 PCDHA10-203ENST00000562220 12358 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 ALDH1L1-210ENST00000472186 3157 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
HOXD11P31277 PWAR5-201ENST00000624480 3180 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 LRRC2-AS1-201ENST00000599511 2291 ntBASIC9.24□□□□□ -0.93
HOXD11P31277 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC9.24□□□□□ -0.93
HOXD11P31277 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HOXD11P31277 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC9.24□□□□□ -0.93
HOXD11P31277 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
HOXD11P31277 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 281.1 ms