Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
RFX1P22670 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RFX1P22670 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.21□□□□□ -1.25
RFX1P22670 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RFX1P22670 AC079097.1-201ENST00000512187 1399 ntBASIC7.21□□□□□ -1.25
RFX1P22670 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
RFX1P22670 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.21□□□□□ -1.25
RFX1P22670 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.21□□□□□ -1.25
RFX1P22670 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RFX1P22670 AL731556.1-201ENST00000394628 3711 ntBASIC7.21□□□□□ -1.25
RFX1P22670 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RFX1P22670 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RFX1P22670 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RFX1P22670 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX1P22670 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX1P22670 SNORD35A-201ENST00000363389 86 ntBASIC7.21□□□□□ -1.26
RFX1P22670 RN7SKP237-201ENST00000364663 301 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AL121972.1-201ENST00000402023 252 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AL078604.1-201ENST00000404609 466 ntBASIC7.21□□□□□ -1.26
RFX1P22670 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.21□□□□□ -1.26
RFX1P22670 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.21□□□□□ -1.26
RFX1P22670 MTATP6P27-201ENST00000416987 621 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AC016831.2-201ENST00000417179 352 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX1P22670 AC115283.1-201ENST00000427353 400 ntBASIC7.21□□□□□ -1.26
RFX1P22670 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RFX1P22670 AC009961.2-201ENST00000435771 251 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX1P22670 AC097359.1-201ENST00000447946 463 ntBASIC7.21□□□□□ -1.26
RFX1P22670 GAPDHP17-201ENST00000449858 1001 ntBASIC7.21□□□□□ -1.26
RFX1P22670 ELOCP23-201ENST00000452014 332 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AL645937.3-201ENST00000453647 936 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AC092757.1-201ENST00000467293 467 ntBASIC7.21□□□□□ -1.26
RFX1P22670 RPL7AP23-201ENST00000482625 776 ntBASIC7.21□□□□□ -1.26
RFX1P22670 H3F3AP3-201ENST00000497682 407 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AC112204.1-201ENST00000502591 103 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AC019235.1-201ENST00000503847 207 ntBASIC7.21□□□□□ -1.26
RFX1P22670 HMGB1P29-201ENST00000505659 499 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.21□□□□□ -1.26
RFX1P22670 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.21□□□□□ -1.26
RFX1P22670 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.21□□□□□ -1.26
RFX1P22670 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX1P22670 OR5AQ1P-201ENST00000527596 927 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC7.21□□□□□ -1.26
RFX1P22670 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.21□□□□□ -1.26
RFX1P22670 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.21□□□□□ -1.26
RFX1P22670 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX1P22670 AL391840.1-201ENST00000571144 367 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX1P22670 AC015982.1-201ENST00000608113 465 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
RFX1P22670 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC7.21□□□□□ -1.26
RFX1P22670 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.21□□□□□ -1.26
RFX1P22670 LRRC77P-213ENST00000637727 880 ntBASIC7.21□□□□□ -1.26
RFX1P22670 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC7.21□□□□□ -1.26
RFX1P22670 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.21□□□□□ -1.26
RFX1P22670 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX1P22670 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RFX1P22670 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RFX1P22670 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX1P22670 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.21□□□□□ -1.26
RFX1P22670 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX1P22670 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RFX1P22670 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.21□□□□□ -1.26
RFX1P22670 AC019072.1-201ENST00000604535 1551 ntBASIC7.2□□□□□ -1.26
RFX1P22670 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.2□□□□□ -1.26
RFX1P22670 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 AC130304.1-201ENST00000622942 2385 ntBASIC7.2□□□□□ -1.26
RFX1P22670 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RFX1P22670 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 AL139384.2-201ENST00000613809 3590 ntBASIC7.2□□□□□ -1.26
RFX1P22670 AC022905.1-201ENST00000503430 3048 ntBASIC7.2□□□□□ -1.26
RFX1P22670 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.2□□□□□ -1.26
RFX1P22670 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.2□□□□□ -1.26
RFX1P22670 AC062022.1-201ENST00000451026 1684 ntBASIC7.2□□□□□ -1.26
RFX1P22670 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
RFX1P22670 UBBP1-201ENST00000392399 473 ntBASIC7.2□□□□□ -1.26
RFX1P22670 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.2□□□□□ -1.26
RFX1P22670 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
RFX1P22670 SNORA11B-201ENST00000408175 129 ntBASIC7.2□□□□□ -1.26
RFX1P22670 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.2□□□□□ -1.26
RFX1P22670 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC7.2□□□□□ -1.26
RFX1P22670 LSM1P1-201ENST00000438629 273 ntBASIC7.2□□□□□ -1.26
RFX1P22670 AC103563.5-201ENST00000455643 364 ntBASIC7.2□□□□□ -1.26
RFX1P22670 RNU6-1218P-201ENST00000458990 108 ntBASIC7.2□□□□□ -1.26
RFX1P22670 RN7SL221P-201ENST00000466190 281 ntBASIC7.2□□□□□ -1.26
RFX1P22670 AC010301.1-201ENST00000473936 355 ntBASIC7.2□□□□□ -1.26
RFX1P22670 AC017015.1-201ENST00000477387 286 ntBASIC7.2□□□□□ -1.26
RFX1P22670 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC7.2□□□□□ -1.26
RFX1P22670 AC091849.1-201ENST00000509920 121 ntBASIC7.2□□□□□ -1.26
RFX1P22670 SAP18P1-201ENST00000512058 390 ntBASIC7.2□□□□□ -1.26
RFX1P22670 RN7SKP96-201ENST00000516948 297 ntBASIC7.2□□□□□ -1.26
RFX1P22670 COX6B1P4-201ENST00000519826 484 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms