Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SAMMSON-226ENST00000642089 1582 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DOAP06340 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DOAP06340 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DOAP06340 RNVU1-6-201ENST00000364688 164 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DOAP06340 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 RNA5SP113-201ENST00000410486 84 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 RNU4-22P-201ENST00000411058 166 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 TATDN1P1-201ENST00000414123 891 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 RPL26P29-201ENST00000415623 438 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 AL590139.1-201ENST00000416267 400 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 MTCO1P43-201ENST00000431831 488 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 AC046176.1-201ENST00000435260 1170 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 MTND1P34-201ENST00000438556 671 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 IGLV2-34-201ENST00000490007 283 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 AP000916.1-201ENST00000533869 835 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 AGGF1P6-201ENST00000569213 976 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 AC068790.2-201ENST00000602601 557 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 AL109653.1-201ENST00000603091 248 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 AC020910.3-201ENST00000603701 874 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 FRG1EP-201ENST00000634469 770 ntBASIC5.9□□□□□ -1.46
HLA-DOAP06340 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DOAP06340 MTND4P5-201ENST00000435821 1374 ntBASIC5.9□□□□□ -1.47
HLA-DOAP06340 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
HLA-DOAP06340 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.9□□□□□ -1.47
HLA-DOAP06340 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.9□□□□□ -1.47
HLA-DOAP06340 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
HLA-DOAP06340 AL356317.1-201ENST00000396110 1436 ntBASIC5.9□□□□□ -1.47
HLA-DOAP06340 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
HLA-DOAP06340 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
HLA-DOAP06340 TTC41P-205ENST00000551270 3963 ntBASIC5.9□□□□□ -1.47
HLA-DOAP06340 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.9□□□□□ -1.47
HLA-DOAP06340 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DOAP06340 AC092070.2-203ENST00000598377 3644 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DOAP06340 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DOAP06340 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 SMG1P7-201ENST00000565246 2704 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DOAP06340 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 MIR192-201ENST00000384915 110 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 ATF1P1-201ENST00000406040 927 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 UBE2V1P9-201ENST00000414760 368 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 SNRPFP2-201ENST00000440710 251 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 TXNP5-201ENST00000441043 315 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 RPL5P25-201ENST00000441148 775 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 CEACAMP9-201ENST00000442990 513 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 OR1H1P-201ENST00000448731 937 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 PTGES3P5-201ENST00000455109 434 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 HMGB1P4-201ENST00000455362 567 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 SUMO1P1-201ENST00000497904 306 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DOAP06340 BNIP3P1-201ENST00000547295 580 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 AL390726.5-202ENST00000564800 256 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 CCDC58P3-201ENST00000590792 430 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 AL512782.1-201ENST00000603093 364 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AL391358.1-201ENST00000605342 190 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC090425.2-201ENST00000608818 501 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC009318.3-201ENST00000616916 503 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC013470.4-201ENST00000619978 986 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC105105.5-201ENST00000622635 1294 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 AC083865.1-201ENST00000636634 831 ntBASIC5.89□□□□□ -1.47
HLA-DOAP06340 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms