Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AC008013.2-202ENST00000637965 364 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AC021242.1-201ENST00000507315 2035 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AL158163.1-201ENST00000603915 1649 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 RNA5SP509-201ENST00000364577 119 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 OR13Z1P-201ENST00000416141 834 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AL157831.1-201ENST00000426134 473 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AC022795.1-201ENST00000473808 480 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 RN7SL691P-201ENST00000494487 301 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AC108145.1-201ENST00000503770 153 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 RFPL4AP5-201ENST00000514977 504 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AC006064.5-201ENST00000541782 248 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 MIR4277-201ENST00000578298 84 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 RNU6-84P-201ENST00000607737 102 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AL121890.2-201ENST00000617644 465 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AL592182.3-201ENST00000642132 3304 ntBASIC4.36□□□□□ -1.71
HLA-DQB2P05538 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DQB2P05538 NOL8P1-201ENST00000508336 3529 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 LINC01355-201ENST00000566551 5444 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 DDX18P6-201ENST00000450119 1997 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 RNA5SP28-201ENST00000363841 119 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 RNA5SP36-201ENST00000410197 133 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 RPS23P10-201ENST00000416185 486 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AL592293.2-201ENST00000422292 996 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AL132765.1-201ENST00000434165 553 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 MAPRE1P3-201ENST00000435438 796 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AC013410.1-201ENST00000436223 1232 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AP001804.2-201ENST00000533932 910 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 RPL26P30-202ENST00000602923 645 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 OR7M1P-201ENST00000608946 533 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AL121890.3-201ENST00000618494 516 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 MIR7154-201ENST00000620673 73 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 AL139254.3-201ENST00000641097 674 ntBASIC4.35□□□□□ -1.71
HLA-DQB2P05538 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB2P05538 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 RN7SKP235-201ENST00000410662 305 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 RNA5SP146-201ENST00000410743 123 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 CBX1P3-201ENST00000413296 527 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AL161631.1-201ENST00000417933 486 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 EIF1P3-201ENST00000423841 334 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 SETP10-201ENST00000424368 814 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AL512326.1-201ENST00000443050 721 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 EEF1A1P1-201ENST00000447052 739 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 EIF2S2P2-201ENST00000447161 982 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AC006463.2-201ENST00000473326 348 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms