Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
APOBP04114 EED-206ENST00000527888 1422 ntTSL 2 BASIC2.61□□□□□ -1.99
APOBP04114 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
APOBP04114 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
APOBP04114 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC2.61□□□□□ -1.99
APOBP04114 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC2.61□□□□□ -1.99
APOBP04114 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
APOBP04114 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.61□□□□□ -1.99
APOBP04114 AL592291.1-201ENST00000403830 352 ntBASIC2.61□□□□□ -1.99
APOBP04114 AC007738.1-201ENST00000413892 348 ntBASIC2.61□□□□□ -1.99
APOBP04114 TEX41-206ENST00000432608 661 ntTSL 3 BASIC2.61□□□□□ -1.99
APOBP04114 RPL37P3-201ENST00000456825 293 ntBASIC2.61□□□□□ -1.99
APOBP04114 OR9M1P-201ENST00000459641 921 ntBASIC2.61□□□□□ -1.99
APOBP04114 AL358832.1-201ENST00000497800 389 ntBASIC2.61□□□□□ -1.99
APOBP04114 WBP1LP4-201ENST00000505043 344 ntBASIC2.61□□□□□ -1.99
APOBP04114 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 YPEL5P2-201ENST00000605553 359 ntBASIC2.61□□□□□ -1.99
APOBP04114 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC2.61□□□□□ -1.99
APOBP04114 AP003175.1-201ENST00000641383 6658 ntBASIC2.61□□□□□ -1.99
APOBP04114 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC2.61□□□□□ -1.99
APOBP04114 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
APOBP04114 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
APOBP04114 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC2.61□□□□□ -1.99
APOBP04114 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
APOBP04114 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.61□□□□□ -1.99
APOBP04114 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 CREM-220ENST00000463314 964 ntTSL 2 BASIC2.61□□□□□ -1.99
APOBP04114 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.61□□□□□ -1.99
APOBP04114 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
APOBP04114 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.61□□□□□ -1.99
APOBP04114 AC115621.1-201ENST00000604653 858 ntBASIC2.61□□□□□ -1.99
APOBP04114 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
APOBP04114 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
APOBP04114 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
APOBP04114 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC2.6□□□□□ -1.99
APOBP04114 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
APOBP04114 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 EI24P3-201ENST00000399046 1062 ntBASIC2.6□□□□□ -1.99
APOBP04114 AL451050.1-201ENST00000450126 415 ntBASIC2.6□□□□□ -1.99
APOBP04114 AC093166.2-201ENST00000455969 1017 ntBASIC2.6□□□□□ -1.99
APOBP04114 AL049873.1-201ENST00000480540 376 ntBASIC2.6□□□□□ -1.99
APOBP04114 RANP9-201ENST00000519957 271 ntBASIC2.6□□□□□ -1.99
APOBP04114 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBP04114 AC024224.1-201ENST00000538284 609 ntBASIC2.6□□□□□ -1.99
APOBP04114 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC2.6□□□□□ -1.99
APOBP04114 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC2.6□□□□□ -1.99
APOBP04114 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC2.6□□□□□ -1.99
APOBP04114 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 SNORD3H-201ENST00000384486 214 ntBASIC2.6□□□□□ -1.99
APOBP04114 Y_RNA.510-201ENST00000384511 114 ntBASIC2.6□□□□□ -1.99
APOBP04114 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBP04114 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 RPL5P24-201ENST00000463742 885 ntBASIC2.6□□□□□ -1.99
APOBP04114 EEF1A1P25-201ENST00000495704 1267 ntBASIC2.6□□□□□ -1.99
APOBP04114 AC097486.1-201ENST00000515331 210 ntBASIC2.6□□□□□ -1.99
APOBP04114 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBP04114 AL160290.3-201ENST00000604869 165 ntBASIC2.6□□□□□ -1.99
APOBP04114 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.6□□□□□ -1.99
APOBP04114 Y_RNA.500-201ENST00000384466 111 ntBASIC2.6□□□□□ -1.99
APOBP04114 AL139095.1-201ENST00000404326 391 ntBASIC2.6□□□□□ -1.99
APOBP04114 MTND6P5-201ENST00000448266 512 ntBASIC2.6□□□□□ -1.99
APOBP04114 AC092691.2-201ENST00000461787 803 ntBASIC2.6□□□□□ -1.99
APOBP04114 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.6□□□□□ -1.99
APOBP04114 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBP04114 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 HYDIN2-203ENST00000614586 13885 ntBASIC2.6□□□□□ -1.99
APOBP04114 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.6□□□□□ -1.99
APOBP04114 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
APOBP04114 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.6□□□□□ -1.99
APOBP04114 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
APOBP04114 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
APOBP04114 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC2.59□□□□□ -1.99
APOBP04114 APOA2-207ENST00000470459 416 ntTSL 5 BASIC2.59□□□□□ -1.99
APOBP04114 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC2.59□□□□□ -1.99
APOBP04114 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 AC124068.1-201ENST00000563131 678 ntBASIC2.59□□□□□ -1.99
APOBP04114 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.59□□□□□ -1.99
APOBP04114 MIR6868-201ENST00000611215 58 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms