Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
COL1A1P02452 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL1A1P02452 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
COL1A1P02452 CYCSP19-201ENST00000411715 316 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 AL356968.2-201ENST00000412769 1257 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.23□□□□□ -1.57
COL1A1P02452 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.23□□□□□ -1.57
COL1A1P02452 AL356276.2-201ENST00000435919 558 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.23□□□□□ -1.57
COL1A1P02452 AC112206.1-201ENST00000468416 477 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 AC108064.1-201ENST00000513791 460 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 SNORA67.7-201ENST00000516664 135 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 MIR3158-1-201ENST00000583596 81 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 FAM27D1-201ENST00000612308 341 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 AL353726.1-201ENST00000614041 1000 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
COL1A1P02452 MIR7151-201ENST00000617477 60 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL1A1P02452 AC005086.4-201ENST00000623065 213 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL1A1P02452 AP001157.1-201ENST00000550837 2339 ntBASIC5.23□□□□□ -1.57
COL1A1P02452 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
COL1A1P02452 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.23□□□□□ -1.57
COL1A1P02452 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.23□□□□□ -1.57
COL1A1P02452 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL1A1P02452 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL1A1P02452 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL1A1P02452 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL1A1P02452 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL1A1P02452 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL1A1P02452 RNA5SP283-201ENST00000365604 119 ntBASIC5.22□□□□□ -1.57
COL1A1P02452 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.22□□□□□ -1.57
COL1A1P02452 RN7SL812P-201ENST00000493791 279 ntBASIC5.22□□□□□ -1.57
COL1A1P02452 RNA5SP360-201ENST00000516555 118 ntBASIC5.22□□□□□ -1.57
COL1A1P02452 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.22□□□□□ -1.57
COL1A1P02452 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.22□□□□□ -1.57
COL1A1P02452 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.22□□□□□ -1.57
COL1A1P02452 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.22□□□□□ -1.57
COL1A1P02452 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.22□□□□□ -1.57
COL1A1P02452 RNU4-89P-201ENST00000607443 133 ntBASIC5.22□□□□□ -1.57
COL1A1P02452 MIR6867-201ENST00000610636 67 ntBASIC5.22□□□□□ -1.57
COL1A1P02452 AC091905.2-201ENST00000623143 306 ntBASIC5.22□□□□□ -1.57
COL1A1P02452 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.22□□□□□ -1.57
COL1A1P02452 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.22□□□□□ -1.57
COL1A1P02452 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL1A1P02452 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL1A1P02452 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.22□□□□□ -1.57
COL1A1P02452 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL1A1P02452 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL1A1P02452 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
COL1A1P02452 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.22□□□□□ -1.57
COL1A1P02452 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.22□□□□□ -1.57
COL1A1P02452 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL1A1P02452 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL1A1P02452 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL1A1P02452 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL1A1P02452 AL590806.1-201ENST00000415818 853 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL1A1P02452 AL117339.2-201ENST00000430475 180 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 SERPINA7P1-201ENST00000443077 631 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.21□□□□□ -1.58
COL1A1P02452 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.21□□□□□ -1.58
COL1A1P02452 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL1A1P02452 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
COL1A1P02452 VN1R105P-201ENST00000486595 910 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 AC010374.1-201ENST00000503762 1237 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 RNA5SP143-201ENST00000516936 115 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL1A1P02452 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL1A1P02452 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.21□□□□□ -1.58
COL1A1P02452 MIR4444-1-201ENST00000581696 74 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 MIR4444-2-201ENST00000584390 74 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 AC025175.1-201ENST00000606482 759 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL1A1P02452 CDRT1-208ENST00000630868 794 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL1A1P02452 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL1A1P02452 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.21□□□□□ -1.58
COL1A1P02452 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL1A1P02452 HSPD1P14-201ENST00000432666 1618 ntBASIC5.21□□□□□ -1.58
COL1A1P02452 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL1A1P02452 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
COL1A1P02452 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL1A1P02452 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL1A1P02452 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
COL1A1P02452 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.21□□□□□ -1.58
COL1A1P02452 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
COL1A1P02452 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.21□□□□□ -1.58
COL1A1P02452 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.2□□□□□ -1.58
COL1A1P02452 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.2□□□□□ -1.58
COL1A1P02452 YY1P1-201ENST00000427625 668 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 COX6B1P7-201ENST00000430845 235 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.2□□□□□ -1.58
COL1A1P02452 MRPL50P1-201ENST00000431951 384 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.2□□□□□ -1.58
COL1A1P02452 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.2□□□□□ -1.58
COL1A1P02452 RPL5P32-201ENST00000454085 879 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 SETP4-201ENST00000455717 868 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.2□□□□□ -1.58
COL1A1P02452 AC091959.2-201ENST00000477363 321 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms