Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFBP01127 AC093535.2-201ENST00000624769 2326 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFBP01127 AC025574.1-201ENST00000554784 1653 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFBP01127 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.86□□□□□ -1.63
PDGFBP01127 AL451142.2-201ENST00000429076 2090 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFBP01127 RNU4-44P-201ENST00000363050 141 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AC083799.1-201ENST00000366451 910 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 RNU1-82P-201ENST00000390851 165 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 NPM1P10-201ENST00000398310 865 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 ADAM24P-201ENST00000398655 2101 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 RNA5SP317-201ENST00000410176 116 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 RNA5SP311-201ENST00000411290 116 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 RPL7AP25-201ENST00000423357 805 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AL645608.4-201ENST00000423619 154 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AL445528.1-201ENST00000426330 420 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFBP01127 AC092013.1-201ENST00000438795 332 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFBP01127 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFBP01127 HMGB1P47-201ENST00000511281 589 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AC108120.2-201ENST00000512973 294 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 RNA5SP315-201ENST00000516340 116 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 RNA5SP312-201ENST00000517068 116 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFBP01127 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.86□□□□□ -1.63
PDGFBP01127 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFBP01127 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFBP01127 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFBP01127 AC068714.1-201ENST00000559623 800 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFBP01127 RN7SL802P-201ENST00000577858 299 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.86□□□□□ -1.63
PDGFBP01127 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFBP01127 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFBP01127 AC123786.2-201ENST00000603459 275 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AL591034.3-201ENST00000605511 685 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.86□□□□□ -1.63
PDGFBP01127 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.86□□□□□ -1.63
PDGFBP01127 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.86□□□□□ -1.63
PDGFBP01127 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.86□□□□□ -1.63
PDGFBP01127 AL139254.3-201ENST00000641097 674 ntBASIC4.86□□□□□ -1.63
PDGFBP01127 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PDGFBP01127 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PDGFBP01127 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PDGFBP01127 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFBP01127 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFBP01127 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFBP01127 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.86□□□□□ -1.63
PDGFBP01127 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFBP01127 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFBP01127 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFBP01127 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PDGFBP01127 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PDGFBP01127 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PDGFBP01127 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PDGFBP01127 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PDGFBP01127 RNU6-304P-201ENST00000364855 107 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 BMS1P3-201ENST00000372011 932 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 MIR320B1-201ENST00000390209 79 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 RNA5SP345-201ENST00000410646 108 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 RNA5SP498-201ENST00000411342 120 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 AL121878.1-201ENST00000418638 859 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 HSPE1P16-201ENST00000426640 348 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 RPS29P17-201ENST00000430795 166 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 AC009238.2-201ENST00000431026 355 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 AL450023.3-201ENST00000440592 271 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 EIF4A1P11-201ENST00000451239 222 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.85□□□□□ -1.63
PDGFBP01127 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.85□□□□□ -1.63
PDGFBP01127 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.85□□□□□ -1.63
PDGFBP01127 RPS12P31-201ENST00000491419 398 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.85□□□□□ -1.63
PDGFBP01127 RPS24P16-201ENST00000497294 392 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.85□□□□□ -1.63
PDGFBP01127 FABP5P6-201ENST00000510588 409 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.85□□□□□ -1.63
PDGFBP01127 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.85□□□□□ -1.63
PDGFBP01127 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.85□□□□□ -1.63
PDGFBP01127 AC107918.3-201ENST00000533272 382 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.85□□□□□ -1.63
PDGFBP01127 RN7SL652P-201ENST00000577769 300 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 MIR5699-201ENST00000578903 90 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.85□□□□□ -1.63
PDGFBP01127 MIMT1-201ENST00000597105 1050 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms