Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC005912.1-201ENST00000495392 255 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 AC090071.1-201ENST00000507713 644 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AC093815.1-201ENST00000508637 280 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 ST13P12-201ENST00000508958 1094 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.56□□□□□ -1.52
CNOT4O95628 ZNF519P4-201ENST00000514008 125 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.56□□□□□ -1.52
CNOT4O95628 AC116347.2-201ENST00000514912 523 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.56□□□□□ -1.52
CNOT4O95628 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.56□□□□□ -1.52
CNOT4O95628 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.56□□□□□ -1.52
CNOT4O95628 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.56□□□□□ -1.52
CNOT4O95628 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.56□□□□□ -1.52
CNOT4O95628 AP004247.1-201ENST00000531556 1289 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.56□□□□□ -1.52
CNOT4O95628 YWHABP2-201ENST00000540201 713 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.56□□□□□ -1.52
CNOT4O95628 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.56□□□□□ -1.52
CNOT4O95628 AC092747.2-201ENST00000545069 983 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AC073916.1-201ENST00000545095 130 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.56□□□□□ -1.52
CNOT4O95628 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.56□□□□□ -1.52
CNOT4O95628 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.56□□□□□ -1.52
CNOT4O95628 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.56□□□□□ -1.52
CNOT4O95628 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 AC004825.1-201ENST00000555068 586 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.56□□□□□ -1.52
CNOT4O95628 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.56□□□□□ -1.52
CNOT4O95628 AC069545.1-201ENST00000605671 358 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AC068276.1-201ENST00000605793 379 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AL008723.3-201ENST00000608926 449 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AL096712.1-201ENST00000614561 159 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AL136981.2-201ENST00000617319 734 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 TCL6_3.1-201ENST00000619064 137 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AC005840.5-201ENST00000619166 599 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.56□□□□□ -1.52
CNOT4O95628 OR5AK4P-201ENST00000635912 903 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 AC027575.3-201ENST00000583058 2747 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.56□□□□□ -1.52
CNOT4O95628 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.56□□□□□ -1.52
CNOT4O95628 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.56□□□□□ -1.52
CNOT4O95628 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.56□□□□□ -1.52
CNOT4O95628 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNOT4O95628 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CNOT4O95628 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.55□□□□□ -1.52
CNOT4O95628 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.55□□□□□ -1.52
CNOT4O95628 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNOT4O95628 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
CNOT4O95628 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
CNOT4O95628 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNOT4O95628 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNOT4O95628 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNOT4O95628 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.55□□□□□ -1.52
CNOT4O95628 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CNOT4O95628 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNOT4O95628 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNOT4O95628 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CNOT4O95628 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNOT4O95628 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CNOT4O95628 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNOT4O95628 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
CNOT4O95628 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CNOT4O95628 RNU4-91P-201ENST00000364778 135 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CNOT4O95628 SUGT1P2-201ENST00000379452 992 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 Y_RNA.390-201ENST00000383932 102 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNOT4O95628 MTCO3P31-201ENST00000405526 789 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 TPT1P2-201ENST00000413105 503 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 AL035422.1-201ENST00000414193 397 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.55□□□□□ -1.52
CNOT4O95628 RPS26P47-201ENST00000427219 348 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 AL354707.3-201ENST00000427308 331 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.55□□□□□ -1.52
CNOT4O95628 RPSAP65-201ENST00000429660 595 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.55□□□□□ -1.52
CNOT4O95628 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.55□□□□□ -1.52
CNOT4O95628 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.55□□□□□ -1.52
CNOT4O95628 AC093155.1-201ENST00000440164 826 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.55□□□□□ -1.52
CNOT4O95628 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.55□□□□□ -1.52
CNOT4O95628 EEF1E1P1-201ENST00000446998 430 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 AC079776.3-201ENST00000450665 370 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 EIF4A1P11-201ENST00000451239 222 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 DDX39BP2-208ENST00000453923 258 ntBASIC5.55□□□□□ -1.52
CNOT4O95628 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms