Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.96□□□□□ -1.62
GPC4O75487 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.96□□□□□ -1.62
GPC4O75487 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC4O75487 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
GPC4O75487 CASC19-204ENST00000641001 2055 ntBASIC4.96□□□□□ -1.62
GPC4O75487 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC4O75487 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC4O75487 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.96□□□□□ -1.62
GPC4O75487 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GPC4O75487 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.96□□□□□ -1.62
GPC4O75487 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 AC007996.1-201ENST00000620414 2821 ntBASIC4.95□□□□□ -1.62
GPC4O75487 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 SNORD56.4-201ENST00000363883 71 ntBASIC4.95□□□□□ -1.62
GPC4O75487 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 RNU4-31P-201ENST00000384211 141 ntBASIC4.95□□□□□ -1.62
GPC4O75487 HMGB1P13-201ENST00000406019 642 ntBASIC4.95□□□□□ -1.62
GPC4O75487 MIR1271-201ENST00000408537 86 ntBASIC4.95□□□□□ -1.62
GPC4O75487 RNU4-34P-201ENST00000410431 124 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AC105402.1-201ENST00000413336 545 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.95□□□□□ -1.62
GPC4O75487 AL450023.3-201ENST00000440592 271 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.95□□□□□ -1.62
GPC4O75487 AC097499.1-201ENST00000444277 208 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.95□□□□□ -1.62
GPC4O75487 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.95□□□□□ -1.62
GPC4O75487 AL031584.1-201ENST00000447169 754 ntBASIC4.95□□□□□ -1.62
GPC4O75487 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 AC026348.1-201ENST00000462549 1053 ntBASIC4.95□□□□□ -1.62
GPC4O75487 ATP5G1P3-201ENST00000463301 410 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AC022795.1-201ENST00000473808 480 ntBASIC4.95□□□□□ -1.62
GPC4O75487 NIP7P2-201ENST00000485801 544 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.95□□□□□ -1.62
GPC4O75487 AC093801.2-201ENST00000503966 1050 ntBASIC4.95□□□□□ -1.62
GPC4O75487 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 BUD31P1-201ENST00000521828 359 ntBASIC4.95□□□□□ -1.62
GPC4O75487 RPL23AP53-201ENST00000521854 457 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.95□□□□□ -1.62
GPC4O75487 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 AC022882.1-201ENST00000532142 501 ntBASIC4.95□□□□□ -1.62
GPC4O75487 OR7E128P-201ENST00000532736 1024 ntBASIC4.95□□□□□ -1.62
GPC4O75487 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.95□□□□□ -1.62
GPC4O75487 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 AC125612.1-201ENST00000547580 377 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.95□□□□□ -1.62
GPC4O75487 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.95□□□□□ -1.62
GPC4O75487 AC084759.1-201ENST00000561168 290 ntBASIC4.95□□□□□ -1.62
GPC4O75487 MIR3691-201ENST00000578066 90 ntBASIC4.95□□□□□ -1.62
GPC4O75487 MIR548Y-201ENST00000582739 110 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.95□□□□□ -1.62
GPC4O75487 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.95□□□□□ -1.62
GPC4O75487 AC068620.3-201ENST00000602749 560 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AC090525.3-201ENST00000605601 189 ntBASIC4.95□□□□□ -1.62
GPC4O75487 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.95□□□□□ -1.62
GPC4O75487 OR51H2P-202ENST00000641424 3046 ntBASIC4.95□□□□□ -1.62
GPC4O75487 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
GPC4O75487 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.95□□□□□ -1.62
GPC4O75487 AC109780.1-201ENST00000451768 1344 ntBASIC4.95□□□□□ -1.62
GPC4O75487 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GPC4O75487 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.94□□□□□ -1.62
GPC4O75487 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.94□□□□□ -1.62
GPC4O75487 AC093311.1-201ENST00000506586 2021 ntBASIC4.94□□□□□ -1.62
GPC4O75487 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.94□□□□□ -1.62
GPC4O75487 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
GPC4O75487 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GPC4O75487 MIR620-201ENST00000385232 95 ntBASIC4.94□□□□□ -1.62
GPC4O75487 AC013442.1-201ENST00000397347 228 ntBASIC4.94□□□□□ -1.62
GPC4O75487 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.94□□□□□ -1.62
GPC4O75487 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.94□□□□□ -1.62
GPC4O75487 DPPA2P3-201ENST00000411853 655 ntBASIC4.94□□□□□ -1.62
GPC4O75487 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.94□□□□□ -1.62
GPC4O75487 RPL36AP10-201ENST00000421785 322 ntBASIC4.94□□□□□ -1.62
GPC4O75487 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.94□□□□□ -1.62
GPC4O75487 AL627308.1-201ENST00000435693 821 ntBASIC4.94□□□□□ -1.62
GPC4O75487 YWHAZP2-201ENST00000440317 728 ntBASIC4.94□□□□□ -1.62
GPC4O75487 TXNP5-201ENST00000441043 315 ntBASIC4.94□□□□□ -1.62
GPC4O75487 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.94□□□□□ -1.62
GPC4O75487 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.94□□□□□ -1.62
GPC4O75487 TCEA1P1-201ENST00000449716 880 ntBASIC4.94□□□□□ -1.62
GPC4O75487 IGHV5-78-201ENST00000450948 295 ntBASIC4.94□□□□□ -1.62
GPC4O75487 HMGB1P4-201ENST00000455362 567 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms