Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.5□□□□□ -1.69
SHOX2O60902 OR5D15P-201ENST00000531671 942 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SHOX2O60902 AC105129.1-201ENST00000560250 297 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 SULT1C2P2-201ENST00000562517 294 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 AC124856.1-201ENST00000600819 896 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHOX2O60902 Z98200.1-201ENST00000607298 470 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.5□□□□□ -1.69
SHOX2O60902 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.5□□□□□ -1.69
SHOX2O60902 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.5□□□□□ -1.69
SHOX2O60902 AL590763.1-201ENST00000398297 1545 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHOX2O60902 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHOX2O60902 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
SHOX2O60902 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHOX2O60902 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHOX2O60902 CUL4AP1-201ENST00000514750 1863 ntBASIC4.49□□□□□ -1.69
SHOX2O60902 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.49□□□□□ -1.69
SHOX2O60902 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SHOX2O60902 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHOX2O60902 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHOX2O60902 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
SHOX2O60902 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SHOX2O60902 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.49□□□□□ -1.69
SHOX2O60902 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.49□□□□□ -1.69
SHOX2O60902 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.49□□□□□ -1.69
SHOX2O60902 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.49□□□□□ -1.69
SHOX2O60902 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.49□□□□□ -1.69
SHOX2O60902 AC108463.1-201ENST00000450258 347 ntBASIC4.49□□□□□ -1.69
SHOX2O60902 AC009220.1-201ENST00000451614 275 ntBASIC4.49□□□□□ -1.69
SHOX2O60902 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.49□□□□□ -1.69
SHOX2O60902 AC072052.1-201ENST00000496556 306 ntBASIC4.49□□□□□ -1.69
SHOX2O60902 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.49□□□□□ -1.69
SHOX2O60902 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.49□□□□□ -1.69
SHOX2O60902 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.49□□□□□ -1.69
SHOX2O60902 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHOX2O60902 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.49□□□□□ -1.69
SHOX2O60902 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.49□□□□□ -1.69
SHOX2O60902 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.49□□□□□ -1.69
SHOX2O60902 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.49□□□□□ -1.69
SHOX2O60902 AF230666.2-201ENST00000602328 725 ntBASIC4.49□□□□□ -1.69
SHOX2O60902 AL713998.2-201ENST00000604538 1198 ntBASIC4.49□□□□□ -1.69
SHOX2O60902 AC096586.2-201ENST00000610260 441 ntBASIC4.49□□□□□ -1.69
SHOX2O60902 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.49□□□□□ -1.69
SHOX2O60902 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHOX2O60902 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHOX2O60902 CPHL1P-201ENST00000461341 3407 ntBASIC4.49□□□□□ -1.69
SHOX2O60902 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.49□□□□□ -1.69
SHOX2O60902 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHOX2O60902 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SHOX2O60902 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.49□□□□□ -1.69
SHOX2O60902 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.49□□□□□ -1.69
SHOX2O60902 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.49□□□□□ -1.69
SHOX2O60902 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHOX2O60902 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.49□□□□□ -1.69
SHOX2O60902 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.49□□□□□ -1.69
SHOX2O60902 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHOX2O60902 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHOX2O60902 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SHOX2O60902 DDX18P3-201ENST00000404856 2007 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 C4BPAP1-201ENST00000415474 1893 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHOX2O60902 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHOX2O60902 SNURFL-201ENST00000309296 343 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHOX2O60902 RNU6-673P-201ENST00000365084 104 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHOX2O60902 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.48□□□□□ -1.69
SHOX2O60902 AMD1P2-201ENST00000412936 992 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AC114755.2-201ENST00000413520 361 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.48□□□□□ -1.69
SHOX2O60902 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.48□□□□□ -1.69
SHOX2O60902 AC011742.1-201ENST00000431448 434 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.48□□□□□ -1.69
SHOX2O60902 AC091390.1-201ENST00000433904 331 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 AL356535.1-201ENST00000440335 398 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AL137845.2-201ENST00000444292 988 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.48□□□□□ -1.69
SHOX2O60902 NDUFA5P8-201ENST00000449019 346 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 RBMY2TP-201ENST00000451162 947 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AURKAPS1-201ENST00000451805 1212 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 VN1R32P-201ENST00000452234 905 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.48□□□□□ -1.69
SHOX2O60902 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHOX2O60902 RN7SL244P-201ENST00000493405 297 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.48□□□□□ -1.69
SHOX2O60902 MIR4675-201ENST00000577898 77 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.48□□□□□ -1.69
SHOX2O60902 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 AL137072.1-201ENST00000603444 466 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AL049539.1-201ENST00000611964 459 ntBASIC4.48□□□□□ -1.69
SHOX2O60902 AC015922.4-201ENST00000612568 690 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms