Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.85□□□□□ -1.47
OPHN1O60890 AC139365.2-201ENST00000517972 253 ntBASIC5.85□□□□□ -1.47
OPHN1O60890 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.85□□□□□ -1.47
OPHN1O60890 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.85□□□□□ -1.47
OPHN1O60890 RFPL1S-203ENST00000539579 330 ntBASIC5.85□□□□□ -1.47
OPHN1O60890 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.85□□□□□ -1.47
OPHN1O60890 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
OPHN1O60890 AC008126.1-201ENST00000549019 480 ntBASIC5.85□□□□□ -1.47
OPHN1O60890 AC096996.1-201ENST00000563813 325 ntBASIC5.85□□□□□ -1.47
OPHN1O60890 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.85□□□□□ -1.47
OPHN1O60890 AP001094.1-201ENST00000579805 193 ntBASIC5.85□□□□□ -1.47
OPHN1O60890 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.85□□□□□ -1.47
OPHN1O60890 AP000238.1-201ENST00000608759 426 ntBASIC5.85□□□□□ -1.47
OPHN1O60890 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.85□□□□□ -1.47
OPHN1O60890 MFSD8-245ENST00000641743 948 ntBASIC5.85□□□□□ -1.47
OPHN1O60890 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
OPHN1O60890 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.85□□□□□ -1.47
OPHN1O60890 MAPK10-328ENST00000641553 4009 ntBASIC5.85□□□□□ -1.47
OPHN1O60890 AL442128.2-201ENST00000620246 1824 ntBASIC5.85□□□□□ -1.47
OPHN1O60890 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
OPHN1O60890 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
OPHN1O60890 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
OPHN1O60890 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
OPHN1O60890 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
OPHN1O60890 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.84□□□□□ -1.47
OPHN1O60890 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
OPHN1O60890 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
OPHN1O60890 Y_RNA.77-201ENST00000362962 107 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 RNU6-553P-201ENST00000364047 96 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 RNU6-532P-201ENST00000384318 107 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 RNU6-1263P-201ENST00000384601 106 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 RPS3AP26-201ENST00000398259 784 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 AL590084.2-201ENST00000401481 382 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 AL355379.1-201ENST00000405542 640 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 MIR1286-201ENST00000408112 78 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 TCEA1P4-201ENST00000415066 844 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
OPHN1O60890 RNF10P1-201ENST00000418589 369 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 RPL23AP4-201ENST00000427757 463 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 CNOT7P1-201ENST00000429006 852 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 USP9YP14-201ENST00000430663 563 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.84□□□□□ -1.47
OPHN1O60890 AC099670.2-201ENST00000435130 321 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.84□□□□□ -1.47
OPHN1O60890 ELOCP8-201ENST00000439309 332 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 ELOCP15-201ENST00000442090 332 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 AC097262.1-201ENST00000452559 548 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 SNORD125-201ENST00000459538 96 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 RPS17P15-201ENST00000475609 349 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.84□□□□□ -1.47
OPHN1O60890 AC093755.1-201ENST00000512950 1023 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 AL117351.2-201ENST00000513571 157 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.84□□□□□ -1.47
OPHN1O60890 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 YWHABP2-201ENST00000540201 713 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 AC137627.1-201ENST00000545761 289 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 AC044913.1-201ENST00000557200 430 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
OPHN1O60890 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.84□□□□□ -1.47
OPHN1O60890 MIR4433B-201ENST00000581329 102 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.84□□□□□ -1.47
OPHN1O60890 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 AC068792.1-201ENST00000621354 417 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 Z69908.1-201ENST00000622603 247 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 AC087821.2-201ENST00000637086 450 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
OPHN1O60890 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
OPHN1O60890 MRRFP1-201ENST00000435941 1675 ntBASIC5.84□□□□□ -1.47
OPHN1O60890 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
OPHN1O60890 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.84□□□□□ -1.48
OPHN1O60890 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
OPHN1O60890 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
OPHN1O60890 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
OPHN1O60890 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.84□□□□□ -1.48
OPHN1O60890 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.83□□□□□ -1.48
OPHN1O60890 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
OPHN1O60890 SGO1P1-201ENST00000603525 1447 ntBASIC5.83□□□□□ -1.48
OPHN1O60890 CASC19-206ENST00000641028 1430 ntBASIC5.83□□□□□ -1.48
OPHN1O60890 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
OPHN1O60890 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.83□□□□□ -1.48
OPHN1O60890 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
OPHN1O60890 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
OPHN1O60890 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
OPHN1O60890 AC235565.1-201ENST00000456962 1325 ntBASIC5.83□□□□□ -1.48
OPHN1O60890 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
OPHN1O60890 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
OPHN1O60890 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
OPHN1O60890 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
OPHN1O60890 RNU6-666P-201ENST00000363499 107 ntBASIC5.83□□□□□ -1.48
OPHN1O60890 MIR525-201ENST00000384978 85 ntBASIC5.83□□□□□ -1.48
OPHN1O60890 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.83□□□□□ -1.48
OPHN1O60890 AC098592.1-201ENST00000419352 333 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms