Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL158825.1-201ENST00000414735 521 ntBASIC4.6□□□□□ -1.67
SNX3O60493 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.6□□□□□ -1.67
SNX3O60493 ATG4AP1-201ENST00000416893 538 ntBASIC4.6□□□□□ -1.67
SNX3O60493 GTF3AP1-201ENST00000416942 1004 ntBASIC4.6□□□□□ -1.67
SNX3O60493 UBTFL3-201ENST00000418934 1024 ntBASIC4.6□□□□□ -1.67
SNX3O60493 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX3O60493 CENPIP1-201ENST00000425713 902 ntBASIC4.6□□□□□ -1.67
SNX3O60493 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX3O60493 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX3O60493 AC079807.1-201ENST00000429993 481 ntBASIC4.6□□□□□ -1.67
SNX3O60493 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX3O60493 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX3O60493 AL035458.1-201ENST00000433096 585 ntBASIC4.6□□□□□ -1.67
SNX3O60493 RPS27P5-201ENST00000444247 244 ntBASIC4.6□□□□□ -1.67
SNX3O60493 MOB1AP2-201ENST00000446060 614 ntBASIC4.6□□□□□ -1.67
SNX3O60493 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SNX3O60493 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX3O60493 HMGB1P26-201ENST00000452520 628 ntBASIC4.6□□□□□ -1.67
SNX3O60493 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX3O60493 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX3O60493 UBTFL6-201ENST00000477929 1024 ntBASIC4.6□□□□□ -1.67
SNX3O60493 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX3O60493 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX3O60493 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.6□□□□□ -1.67
SNX3O60493 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX3O60493 AC108471.1-201ENST00000513977 287 ntBASIC4.6□□□□□ -1.67
SNX3O60493 RNA5SP473-201ENST00000516402 125 ntBASIC4.6□□□□□ -1.67
SNX3O60493 SCARNA21.2-201ENST00000516600 166 ntBASIC4.6□□□□□ -1.67
SNX3O60493 IFITM8P-201ENST00000522529 394 ntBASIC4.6□□□□□ -1.67
SNX3O60493 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX3O60493 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX3O60493 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX3O60493 AL109741.3-201ENST00000561748 592 ntBASIC4.6□□□□□ -1.67
SNX3O60493 CYP4A43P-201ENST00000568156 121 ntBASIC4.6□□□□□ -1.67
SNX3O60493 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX3O60493 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX3O60493 AP002360.3-201ENST00000607673 710 ntBASIC4.6□□□□□ -1.67
SNX3O60493 AC020634.1-201ENST00000608701 549 ntBASIC4.6□□□□□ -1.67
SNX3O60493 MIR6780B-201ENST00000610307 79 ntBASIC4.6□□□□□ -1.67
SNX3O60493 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX3O60493 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX3O60493 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SNX3O60493 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX3O60493 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX3O60493 MAPK10-253ENST00000641010 4072 ntBASIC4.6□□□□□ -1.67
SNX3O60493 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX3O60493 MTCO1P4-201ENST00000520516 1409 ntBASIC4.6□□□□□ -1.67
SNX3O60493 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX3O60493 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX3O60493 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX3O60493 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX3O60493 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX3O60493 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX3O60493 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX3O60493 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX3O60493 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SNX3O60493 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX3O60493 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX3O60493 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SNX3O60493 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX3O60493 RNA5SP428-201ENST00000365129 132 ntBASIC4.59□□□□□ -1.67
SNX3O60493 RNU6-185P-201ENST00000384421 107 ntBASIC4.59□□□□□ -1.67
SNX3O60493 RNU1-44P-201ENST00000384453 163 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AF186996.5-201ENST00000418098 904 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX3O60493 AL606495.1-201ENST00000422100 813 ntBASIC4.59□□□□□ -1.67
SNX3O60493 DDX39BP1-205ENST00000422507 192 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AL512637.2-201ENST00000431287 1256 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX3O60493 TMX2P1-201ENST00000436507 708 ntBASIC4.59□□□□□ -1.67
SNX3O60493 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX3O60493 RPL34P26-201ENST00000445636 354 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX3O60493 CLIC4P1-201ENST00000453177 535 ntBASIC4.59□□□□□ -1.67
SNX3O60493 RN7SL168P-201ENST00000463821 279 ntBASIC4.59□□□□□ -1.67
SNX3O60493 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX3O60493 AC016550.1-201ENST00000505348 785 ntBASIC4.59□□□□□ -1.67
SNX3O60493 COX6B1P5-201ENST00000509843 249 ntBASIC4.59□□□□□ -1.67
SNX3O60493 MTND5P11-201ENST00000511037 1812 ntBASIC4.59□□□□□ -1.67
SNX3O60493 RN7SKP260-201ENST00000516907 149 ntBASIC4.59□□□□□ -1.67
SNX3O60493 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.59□□□□□ -1.67
SNX3O60493 IGKV2-4-201ENST00000523070 340 ntBASIC4.59□□□□□ -1.67
SNX3O60493 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.59□□□□□ -1.67
SNX3O60493 AC024405.1-201ENST00000532521 1042 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX3O60493 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.59□□□□□ -1.67
SNX3O60493 MIR4271-201ENST00000582451 67 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX3O60493 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.59□□□□□ -1.67
SNX3O60493 ABI1P1-201ENST00000603375 1120 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AC010201.1-201ENST00000605051 540 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AL031666.3-201ENST00000609320 1006 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AC109309.2-201ENST00000612597 332 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX3O60493 AL138721.1-201ENST00000616756 179 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX3O60493 AC007342.8-201ENST00000623278 678 ntBASIC4.59□□□□□ -1.67
SNX3O60493 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX3O60493 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SNX3O60493 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms