Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.11□□□□□ -1.75
SGCEO43556 RNA5SP154-201ENST00000516193 111 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.11□□□□□ -1.75
SGCEO43556 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.11□□□□□ -1.75
SGCEO43556 IGLVIV-53-201ENST00000520107 367 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SGCEO43556 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.11□□□□□ -1.75
SGCEO43556 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.11□□□□□ -1.75
SGCEO43556 RPL21P7-201ENST00000557463 483 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC079075.1-201ENST00000559543 878 ntBASIC4.11□□□□□ -1.75
SGCEO43556 MIR3934-201ENST00000579806 107 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC068790.5-201ENST00000602741 355 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC123786.2-201ENST00000603459 275 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AL139286.1-201ENST00000604465 483 ntBASIC4.11□□□□□ -1.75
SGCEO43556 COX6CP4-201ENST00000605798 228 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC091979.2-201ENST00000607514 214 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC116447.1-201ENST00000613153 453 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AL359757.1-201ENST00000623176 255 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.11□□□□□ -1.75
SGCEO43556 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SGCEO43556 AL445437.1-201ENST00000623157 3087 ntBASIC4.11□□□□□ -1.75
SGCEO43556 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SGCEO43556 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SGCEO43556 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SGCEO43556 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.11□□□□□ -1.75
SGCEO43556 AC009313.2-201ENST00000417893 1941 ntBASIC4.11□□□□□ -1.75
SGCEO43556 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
SGCEO43556 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SGCEO43556 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.1□□□□□ -1.75
SGCEO43556 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 AL672167.1-203ENST00000641299 2975 ntBASIC4.1□□□□□ -1.75
SGCEO43556 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 AL031119.1-201ENST00000404707 1879 ntBASIC4.1□□□□□ -1.75
SGCEO43556 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SGCEO43556 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 Z98745.1-201ENST00000402553 494 ntBASIC4.1□□□□□ -1.75
SGCEO43556 RN7SKP267-201ENST00000410381 285 ntBASIC4.1□□□□□ -1.75
SGCEO43556 RNA5SP104-201ENST00000410989 118 ntBASIC4.1□□□□□ -1.75
SGCEO43556 RSU1P3-201ENST00000412878 835 ntBASIC4.1□□□□□ -1.75
SGCEO43556 BX510359.2-201ENST00000417920 305 ntBASIC4.1□□□□□ -1.75
SGCEO43556 PDSS1P1-201ENST00000422953 1114 ntBASIC4.1□□□□□ -1.75
SGCEO43556 FABP7P1-201ENST00000424004 391 ntBASIC4.1□□□□□ -1.75
SGCEO43556 SKP1P3-201ENST00000429280 487 ntBASIC4.1□□□□□ -1.75
SGCEO43556 CYCSP11-201ENST00000436426 315 ntBASIC4.1□□□□□ -1.75
SGCEO43556 AC016831.4-201ENST00000438302 307 ntBASIC4.1□□□□□ -1.75
SGCEO43556 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.1□□□□□ -1.75
SGCEO43556 RAB28P3-201ENST00000448325 597 ntBASIC4.1□□□□□ -1.75
SGCEO43556 RPL7P61-201ENST00000451721 751 ntBASIC4.1□□□□□ -1.75
SGCEO43556 AC069277.2-201ENST00000454211 432 ntBASIC4.1□□□□□ -1.75
SGCEO43556 RN7SL817P-201ENST00000480777 288 ntBASIC4.1□□□□□ -1.75
SGCEO43556 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.1□□□□□ -1.75
SGCEO43556 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SGCEO43556 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.1□□□□□ -1.75
SGCEO43556 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.1□□□□□ -1.75
SGCEO43556 RN7SKP276-201ENST00000516242 268 ntBASIC4.1□□□□□ -1.75
SGCEO43556 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.1□□□□□ -1.75
SGCEO43556 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.1□□□□□ -1.75
SGCEO43556 AC068446.3-201ENST00000555285 382 ntBASIC4.1□□□□□ -1.75
SGCEO43556 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.1□□□□□ -1.75
SGCEO43556 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.1□□□□□ -1.75
SGCEO43556 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.1□□□□□ -1.75
SGCEO43556 RN7SL652P-201ENST00000577769 300 ntBASIC4.1□□□□□ -1.75
SGCEO43556 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.1□□□□□ -1.75
SGCEO43556 ELOCP28-201ENST00000590044 317 ntBASIC4.1□□□□□ -1.75
SGCEO43556 SNX6P1-201ENST00000601728 1224 ntBASIC4.1□□□□□ -1.75
SGCEO43556 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.1□□□□□ -1.75
SGCEO43556 AC130352.1-201ENST00000602979 661 ntBASIC4.1□□□□□ -1.75
SGCEO43556 AC015922.4-201ENST00000612568 690 ntBASIC4.1□□□□□ -1.75
SGCEO43556 AC105105.5-201ENST00000622635 1294 ntBASIC4.1□□□□□ -1.75
SGCEO43556 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
SGCEO43556 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.1□□□□□ -1.75
SGCEO43556 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SGCEO43556 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SGCEO43556 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SGCEO43556 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SGCEO43556 USP9YP4-201ENST00000424401 1745 ntBASIC4.09□□□□□ -1.75
SGCEO43556 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SGCEO43556 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SGCEO43556 AC093311.1-201ENST00000506586 2021 ntBASIC4.09□□□□□ -1.75
SGCEO43556 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SGCEO43556 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.09□□□□□ -1.75
SGCEO43556 RN7SKP100-201ENST00000411258 284 ntBASIC4.09□□□□□ -1.75
SGCEO43556 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.09□□□□□ -1.75
SGCEO43556 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SGCEO43556 AC004074.1-201ENST00000421810 1063 ntBASIC4.09□□□□□ -1.75
SGCEO43556 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.09□□□□□ -1.75
SGCEO43556 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.09□□□□□ -1.75
SGCEO43556 RPS3AP41-201ENST00000462701 778 ntBASIC4.09□□□□□ -1.75
SGCEO43556 AC006967.1-201ENST00000467608 589 ntBASIC4.09□□□□□ -1.75
SGCEO43556 AC096741.1-201ENST00000472250 846 ntBASIC4.09□□□□□ -1.75
SGCEO43556 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SGCEO43556 AC098799.3-201ENST00000506095 438 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms