Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM38O00635 AC116651.1-201ENST00000609724 556 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AC126915.2-201ENST00000610957 190 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM38O00635 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM38O00635 AC068870.2-201ENST00000620635 389 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AP002505.2-201ENST00000623585 696 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AC098679.4-201ENST00000624241 654 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 AP000676.4-201ENST00000624659 623 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM38O00635 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM38O00635 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 AC005332.5-201ENST00000591222 2919 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM38O00635 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM38O00635 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRIM38O00635 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM38O00635 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
TRIM38O00635 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM38O00635 MTND4P10-201ENST00000446199 1363 ntBASIC5.42□□□□□ -1.54
TRIM38O00635 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM38O00635 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM38O00635 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 AC009313.2-201ENST00000417893 1941 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM38O00635 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 MTND4P22-201ENST00000413116 1169 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 AL590762.4-201ENST00000425885 253 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 AP001324.1-201ENST00000428553 399 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 CDY14P-201ENST00000431260 1014 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.41□□□□□ -1.54
TRIM38O00635 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM38O00635 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 MTCYBP31-201ENST00000438855 1122 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 MRPL35P2-201ENST00000448009 511 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 RSL24D1P3-201ENST00000449255 495 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 AC243772.1-201ENST00000451620 410 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 CDY23P-201ENST00000451661 1014 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 RNU6-1218P-201ENST00000458990 108 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 TRBV8-2-201ENST00000475637 270 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 RPS18P6-201ENST00000476880 458 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 RPL7AP10-201ENST00000481016 791 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 AC091435.1-201ENST00000505442 584 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 AC109464.1-201ENST00000511091 819 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.41□□□□□ -1.54
TRIM38O00635 AC006518.2-201ENST00000542513 940 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 AC087897.1-201ENST00000550134 156 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 NMNAT1P5-201ENST00000559657 841 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 AP001094.1-201ENST00000579805 193 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM38O00635 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 AC104985.3-201ENST00000623479 597 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM38O00635 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.41□□□□□ -1.54
TRIM38O00635 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM38O00635 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 TRIM51GP-201ENST00000534741 1350 ntBASIC5.41□□□□□ -1.54
TRIM38O00635 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM38O00635 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
TRIM38O00635 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM38O00635 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM38O00635 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM38O00635 AC120338.1-201ENST00000625074 1541 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM38O00635 HSPA8P14-201ENST00000552265 1805 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms