Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NCLP2-201ENST00000416078 1462 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC005332.5-201ENST00000591222 2919 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SLC28A1O00337 AC093311.1-201ENST00000506586 2021 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC28A1O00337 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC28A1O00337 MAPK10-263ENST00000641052 4307 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC28A1O00337 AC108751.5-201ENST00000492880 1336 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC28A1O00337 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SLC28A1O00337 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC28A1O00337 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC28A1O00337 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SLC28A1O00337 RN7SKP95-201ENST00000362860 303 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 RN7SKP115-201ENST00000363177 317 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC28A1O00337 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC28A1O00337 RNU6-452P-201ENST00000384406 107 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 MIR195-201ENST00000385194 87 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 SNORD96B-201ENST00000386148 79 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 SNORA68.2-201ENST00000391263 128 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 TRGV6-201ENST00000417928 299 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.54□□□□□ -1.68
SLC28A1O00337 AC073464.3-201ENST00000422564 712 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 AL355433.1-201ENST00000422804 300 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC28A1O00337 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC28A1O00337 AL513321.1-201ENST00000441175 761 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 ARL4AP3-201ENST00000441452 574 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 AC112498.1-201ENST00000444401 332 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 RPL34P26-201ENST00000445636 354 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 AL589765.3-201ENST00000446084 462 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC28A1O00337 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC28A1O00337 AC073850.1-201ENST00000449243 255 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC28A1O00337 RPS5P7-201ENST00000456664 608 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 AC005229.2-201ENST00000456995 399 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 RPL23AP65-201ENST00000475608 468 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 SYT14P1-201ENST00000481459 721 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 GAPDHP56-201ENST00000506031 988 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 COL6A4P2-205ENST00000509855 506 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 TCP11X3P-202ENST00000514289 1254 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC28A1O00337 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC28A1O00337 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC28A1O00337 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.54□□□□□ -1.68
SLC28A1O00337 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC28A1O00337 AC015912.2-201ENST00000571053 181 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 MIR4489-201ENST00000578869 62 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC28A1O00337 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC28A1O00337 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC28A1O00337 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC28A1O00337 HMGB2P1-201ENST00000591146 634 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 AC004775.1-201ENST00000607389 753 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC28A1O00337 AC004232.3-201ENST00000622977 525 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 AC015908.5-201ENST00000623289 343 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC28A1O00337 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC28A1O00337 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC28A1O00337 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SLC28A1O00337 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SLC28A1O00337 EOGT-210ENST00000615922 1931 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 AL031119.1-201ENST00000404707 1879 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 OR51H2P-202ENST00000641424 3046 ntBASIC4.54□□□□□ -1.68
SLC28A1O00337 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SLC28A1O00337 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC28A1O00337 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC28A1O00337 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC28A1O00337 AL355852.1-201ENST00000454081 1771 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC28A1O00337 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC28A1O00337 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC28A1O00337 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SLC28A1O00337 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SLC28A1O00337 RNA5SP305-201ENST00000362665 119 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 RNU4-4P-201ENST00000364588 130 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 MIR765-201ENST00000390226 114 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 RNU1-82P-201ENST00000390851 165 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 AL589647.1-201ENST00000402485 466 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 AL353692.2-201ENST00000407054 335 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC28A1O00337 TMX2P1-201ENST00000436507 708 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC28A1O00337 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC28A1O00337 AURKAPS2-201ENST00000454983 333 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 AC090142.1-201ENST00000465776 462 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC28A1O00337 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.53□□□□□ -1.68
SLC28A1O00337 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC28A1O00337 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
SLC28A1O00337 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC28A1O00337 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.53□□□□□ -1.68
SLC28A1O00337 AC091868.1-201ENST00000508746 304 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 MORF4L1P3-201ENST00000525966 950 ntBASIC4.53□□□□□ -1.68
SLC28A1O00337 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms