Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.57□□□□□ -1.68
PDLIM1O00151 AL450992.3-201ENST00000413192 568 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 AC009302.1-201ENST00000417147 390 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM1O00151 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.57□□□□□ -1.68
PDLIM1O00151 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM1O00151 RPS29P9-201ENST00000440360 171 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 HIGD1AP8-201ENST00000453927 274 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM1O00151 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM1O00151 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM1O00151 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM1O00151 AC006499.6-201ENST00000511169 607 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.57□□□□□ -1.68
PDLIM1O00151 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM1O00151 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.57□□□□□ -1.68
PDLIM1O00151 AC091515.1-201ENST00000548110 679 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM1O00151 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.57□□□□□ -1.68
PDLIM1O00151 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM1O00151 BMS1P7-201ENST00000602440 1052 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 AC013244.1-201ENST00000604279 193 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 AL121612.2-201ENST00000612261 482 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 AL118556.2-201ENST00000614375 824 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 AC103858.2-201ENST00000621471 543 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 AC099494.2-201ENST00000623371 978 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 LINC00216-201ENST00000623548 1126 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 AC097504.1-201ENST00000515103 2415 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM1O00151 AC008725.1-201ENST00000605123 2263 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM1O00151 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PDLIM1O00151 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM1O00151 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 AC017007.4-201ENST00000503353 1352 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PDLIM1O00151 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.56□□□□□ -1.68
PDLIM1O00151 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.56□□□□□ -1.68
PDLIM1O00151 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 MIR513A2-201ENST00000385249 127 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM1O00151 ATP5HP3-201ENST00000396994 486 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 ZNF603P-201ENST00000405613 487 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 RN7SKP126-201ENST00000411143 300 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 RPL23AP27-201ENST00000415161 451 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.56□□□□□ -1.68
PDLIM1O00151 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 AL445528.1-201ENST00000426330 420 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.56□□□□□ -1.68
PDLIM1O00151 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM1O00151 KNOP1P3-201ENST00000446933 426 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 AC239809.1-201ENST00000450470 217 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 AC092647.2-201ENST00000452998 253 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 ATP5G1P3-201ENST00000463301 410 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 AC097484.1-201ENST00000471148 389 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM1O00151 AC092045.1-201ENST00000495716 1231 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.56□□□□□ -1.68
PDLIM1O00151 HMGB1P47-201ENST00000511281 589 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.56□□□□□ -1.68
PDLIM1O00151 RNU6-760P-201ENST00000516078 97 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 RNU6-491P-201ENST00000516099 110 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.56□□□□□ -1.68
PDLIM1O00151 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM1O00151 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM1O00151 AC016180.1-201ENST00000567945 403 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.56□□□□□ -1.68
PDLIM1O00151 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM1O00151 AC006116.3-201ENST00000592968 361 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM1O00151 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM1O00151 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM1O00151 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM1O00151 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM1O00151 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PDLIM1O00151 AL121950.1-201ENST00000624993 2077 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 CASC19-281ENST00000642118 1554 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM1O00151 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PDLIM1O00151 AC090971.4-201ENST00000560291 1800 ntBASIC4.56□□□□□ -1.68
PDLIM1O00151 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.55□□□□□ -1.68
PDLIM1O00151 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.55□□□□□ -1.68
PDLIM1O00151 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
PDLIM1O00151 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms