Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 MIR16-2-201ENST00000362117 81 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 RNA5SP87-201ENST00000384155 118 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 SNORA70.10-201ENST00000384515 134 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 RNU6-796P-201ENST00000391086 107 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 HMGB1P13-201ENST00000406019 642 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 RNU4-27P-201ENST00000410889 139 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 TMX2P1-201ENST00000436507 708 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 RPL5P25-201ENST00000441148 775 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 RPS27P5-201ENST00000444247 244 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 RPL10P17-201ENST00000453852 316 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 EIF2S2P5-201ENST00000457635 968 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 RN7SL738P-201ENST00000470264 297 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AC006463.2-201ENST00000473326 348 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 IGLV2-34-201ENST00000490007 283 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 RN7SL441P-201ENST00000492388 296 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 MRPS33P2-201ENST00000507850 322 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AC092451.2-201ENST00000538746 658 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 BNIP3P1-201ENST00000547295 580 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AC015911.5-201ENST00000587076 451 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AF230666.2-201ENST00000602328 725 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AC096553.1-201ENST00000605169 829 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AP001521.2-201ENST00000608772 546 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AL161616.1-201ENST00000611867 286 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 AC087190.4-201ENST00000574616 8334 ntBASIC4.51□□□□□ -1.69
NPIPA3F8WFD2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 RNU6-609P-201ENST00000365459 107 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 SNORA77-201ENST00000408716 125 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 LINC01881-201ENST00000416103 412 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 UBE2D3P3-201ENST00000426992 425 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 RPL7P11-201ENST00000437586 658 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 YWHAZP2-201ENST00000440317 728 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC008897.1-201ENST00000494006 347 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 GAPDHP56-201ENST00000506031 988 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC092593.2-201ENST00000513866 913 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 TMF1P1-201ENST00000576058 373 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 MIR3667-201ENST00000581025 74 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC233702.9-201ENST00000581528 203 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 MIR4737-201ENST00000583979 81 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AC005377.1-201ENST00000605126 456 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AL008729.2-201ENST00000606393 473 ntBASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.5□□□□□ -1.69
NPIPA3F8WFD2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms