Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC187A0A096LP49 AC111188.2-201ENST00000529697 1387 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 DDX43P2-201ENST00000604753 1354 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 RNU4-92P-201ENST00000363783 136 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AL049545.1-201ENST00000401856 572 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 RN7SKP17-201ENST00000411242 351 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 LINC01881-201ENST00000416103 412 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AL354868.1-201ENST00000417077 482 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 USP24P1-201ENST00000433802 779 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC073410.1-201ENST00000435125 589 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 RPL7P29-201ENST00000437151 728 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC073648.4-201ENST00000442655 781 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 SETD6P1-201ENST00000444575 317 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 Z80107.2-201ENST00000445127 392 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 RSL24D1P3-201ENST00000449255 495 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 RNU7-27P-201ENST00000459281 62 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC005410.1-202ENST00000460347 485 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 RN7SL860P-201ENST00000473738 223 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC090114.3-201ENST00000479267 829 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC069528.1-202ENST00000482888 637 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AP000563.1-201ENST00000490865 758 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 RPS4XP20-201ENST00000505751 772 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 EIF3KP3-201ENST00000514461 639 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 RN7SKP147-201ENST00000517154 244 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 MRPS36P3-201ENST00000519284 130 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AP001094.1-201ENST00000579805 193 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC061975.8-201ENST00000587058 721 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC011447.4-201ENST00000587562 111 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 AC144833.1-201ENST00000567953 4089 ntBASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC187A0A096LP49 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 AL360270.2-201ENST00000562952 5985 ntBASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 TTC39DP-201ENST00000416781 1688 ntBASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 AC093311.1-201ENST00000506586 2021 ntBASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC187A0A096LP49 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC187A0A096LP49 RNU1-87P-201ENST00000363727 170 ntBASIC5.15□□□□□ -1.59
CCDC187A0A096LP49 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC187A0A096LP49 RNU6-1242P-201ENST00000391052 103 ntBASIC5.15□□□□□ -1.59
CCDC187A0A096LP49 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC187A0A096LP49 AC096921.1-201ENST00000411661 375 ntBASIC5.15□□□□□ -1.59
CCDC187A0A096LP49 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC187A0A096LP49 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC187A0A096LP49 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC187A0A096LP49 C1DP1-201ENST00000426049 402 ntBASIC5.15□□□□□ -1.59
CCDC187A0A096LP49 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms