Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CBX1P3-201ENST00000413296 527 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 SETP9-201ENST00000423837 832 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC115285.1-201ENST00000424879 736 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 BX119904.1-201ENST00000432026 348 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AL353898.1-201ENST00000444055 238 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 TRY2P-201ENST00000448860 689 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 TPT1P1-201ENST00000458495 518 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 RPL7P16-201ENST00000479738 738 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 RN7SL244P-201ENST00000493405 297 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC026782.2-201ENST00000510845 636 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 OR7H2P-201ENST00000513483 306 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AL359219.2-201ENST00000555184 348 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 NDUFB4P11-201ENST00000560510 395 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC023825.1-201ENST00000566704 1030 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AGGF1P5-201ENST00000567900 919 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 MIR4660-201ENST00000583549 74 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC018695.5-201ENST00000605872 315 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC093799.2-201ENST00000610062 578 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AL627230.1-201ENST00000613077 211 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 EIF3FP1-201ENST00000613970 806 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AL591926.8-201ENST00000616876 211 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC091905.4-201ENST00000623432 202 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC083865.1-201ENST00000636634 831 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 MTND5P11-201ENST00000511037 1812 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 AC132825.1-201ENST00000463573 2247 ntBASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAI2Q9Y5P3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AC092376.2-201ENST00000622621 4116 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 SNORA66-201ENST00000384792 133 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 MIR1193-201ENST00000408109 78 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 SNORA77-201ENST00000408716 125 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 RNU2-17P-201ENST00000410290 190 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AC019050.1-201ENST00000418508 492 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AC008173.1-201ENST00000418901 264 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 MTCYBP7-201ENST00000419540 1134 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 GTF2IP2-201ENST00000424290 697 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AL138787.1-202ENST00000437804 898 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AL354714.3-201ENST00000447284 493 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 IGHV5-78-201ENST00000450948 295 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 RN7SL441P-201ENST00000492388 296 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 COX6B1P5-201ENST00000509843 249 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 RN7SKP265-201ENST00000516448 223 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 OR7E128P-201ENST00000532736 1024 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 NMNAT1P1-201ENST00000554095 876 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AC002069.2-201ENST00000603580 883 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 RPP40P2-201ENST00000603596 712 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AL109618.2-201ENST00000605527 211 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 MIR92B-201ENST00000607575 96 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AC008432.1-201ENST00000615912 1320 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AL078595.3-201ENST00000623815 1166 ntBASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAI2Q9Y5P3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms