Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PANDAR-201ENST00000629595 1506 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 RN7SKP115-201ENST00000363177 317 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 RNU5B-1-201ENST00000363286 116 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 SNORD56.6-201ENST00000384569 71 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AL035419.1-201ENST00000397037 564 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 OR4K12P-201ENST00000406538 961 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 RN7SKP97-201ENST00000410966 333 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 RBMY2QP-201ENST00000429799 1147 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 RPS6P15-201ENST00000431996 751 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC023512.1-201ENST00000444513 499 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AL096803.2-201ENST00000450032 677 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC002553.2-201ENST00000453217 340 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC079168.1-201ENST00000458741 345 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 RPL35AP28-201ENST00000459730 331 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC113420.1-201ENST00000507903 571 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 RNA5SP373-201ENST00000517271 95 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC025175.1-201ENST00000606482 759 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 FRG1EP-201ENST00000634469 770 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC135068.12-201ENST00000637370 931 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 AL132640.2-201ENST00000559968 1698 ntBASIC5.66□□□□□ -1.5
SSX2IPQ9Y2D8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC119751.3-201ENST00000399720 670 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 DBIP1-201ENST00000401435 260 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AL603865.2-201ENST00000401679 213 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 RNU4-74P-201ENST00000411280 161 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 RPS24P7-201ENST00000416921 246 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC234781.4-201ENST00000419384 244 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AL365338.1-201ENST00000422282 858 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC000041.1-201ENST00000439655 175 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 LINC02210-201ENST00000444561 288 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC239798.3-201ENST00000454459 408 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 BX284632.1-201ENST00000478218 541 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC004980.4-201ENST00000513375 203 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 RN7SKP260-201ENST00000516907 149 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 RNU6-1028P-201ENST00000517164 93 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 MIR3934-201ENST00000579806 107 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC011487.3-201ENST00000593607 453 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC068020.1-201ENST00000594215 661 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC130352.1-201ENST00000602979 661 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC013444.2-201ENST00000603317 787 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC092954.1-201ENST00000609121 445 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AC079416.3-201ENST00000624479 549 ntBASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.65□□□□□ -1.5
SSX2IPQ9Y2D8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms