Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 HMGB2P1-201ENST00000591146 634 ntBASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 AC073137.1-201ENST00000605636 634 ntBASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 MIR6853-201ENST00000619642 74 ntBASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 MIR6730-201ENST00000622213 67 ntBASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 MIR4727-201ENST00000622232 55 ntBASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 AP003499.2-201ENST00000624100 483 ntBASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRAPPC4Q9Y296 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.21□□□□□ -1.73
TRAPPC4Q9Y296 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TRAPPC4Q9Y296 VN2R3P-201ENST00000422626 1412 ntBASIC4.21□□□□□ -1.73
TRAPPC4Q9Y296 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TRAPPC4Q9Y296 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRAPPC4Q9Y296 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRAPPC4Q9Y296 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 RNA5SP39-201ENST00000411245 120 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 VN1R31P-201ENST00000417498 730 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 RFESDP1-201ENST00000422350 461 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AC097523.2-201ENST00000435551 652 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 GEMIN8P3-201ENST00000445417 720 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 SCARNA10-201ENST00000459255 330 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AC083982.1-201ENST00000485679 344 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 PPM1AP1-201ENST00000502740 1135 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 EIF1AXP2-201ENST00000555940 413 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AC124068.1-201ENST00000563131 678 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 MIR4480-201ENST00000582492 71 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AC098935.2-201ENST00000604222 466 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 FAM25E-202ENST00000608562 189 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 AL359757.1-201ENST00000623176 255 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.21□□□□□ -1.74
TRAPPC4Q9Y296 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 SNORA68.2-201ENST00000391263 128 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 SDHCP2-201ENST00000398565 501 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 AC098592.2-201ENST00000413158 265 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 AL139128.1-201ENST00000413921 941 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 RBMY2KP-201ENST00000418221 992 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 NANOGP6-201ENST00000429190 847 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 UBE2V2P3-201ENST00000433562 437 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 AL772161.1-201ENST00000439130 476 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 RPL7L1P1-201ENST00000448259 785 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 AL451050.1-201ENST00000450126 415 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 RPL23AP2-201ENST00000471227 466 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 AC105233.1-201ENST00000498840 781 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 AC098799.3-201ENST00000506095 438 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 CD24P2-201ENST00000565486 219 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 MTATP6P25-201ENST00000574491 261 ntBASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRAPPC4Q9Y296 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms