Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RPS4XP23-201ENST00000487801 237 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 PABPC1P1-201ENST00000506347 591 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RNU6-1261P-201ENST00000517194 104 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 NARSP2-201ENST00000518524 679 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC008562.1-201ENST00000521763 330 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RPS27AP19-201ENST00000597285 458 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AL390877.1-201ENST00000605704 214 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 OR4G1P-202ENST00000641173 1788 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 AC093616.1-201ENST00000427434 2095 ntBASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TRIM35Q9UPQ4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AL158163.1-201ENST00000603915 1649 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 RNU6-108P-201ENST00000365558 107 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 Y_RNA.463-201ENST00000384271 102 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 RNU6-310P-201ENST00000384655 107 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 SSXP10-201ENST00000402595 565 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 MIR1204-201ENST00000408388 67 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 RN7SKP144-201ENST00000411108 279 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 HSD17B7P1-201ENST00000412419 1017 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AL450992.3-201ENST00000413192 568 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 PHB2P1-201ENST00000434943 890 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AC104651.2-201ENST00000447549 528 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 OR1H1P-201ENST00000448731 937 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AL354714.5-201ENST00000450131 590 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AC011005.2-201ENST00000487324 359 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AC108120.2-201ENST00000512973 294 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 RNU4-29P-201ENST00000515943 174 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AC012400.1-201ENST00000518452 381 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AP003072.2-201ENST00000527756 676 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 OR4R1P-201ENST00000529879 463 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 TP53TG1_2.1-201ENST00000611226 182 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 PLCE1P1-201ENST00000622094 305 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AC034229.6-201ENST00000623704 224 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AC131649.2-201ENST00000624925 4439 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AL512329.1-201ENST00000404600 1592 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 AL354854.1-201ENST00000455940 1363 ntBASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TRIM35Q9UPQ4 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AL731566.1-201ENST00000620490 1937 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AL590065.1-201ENST00000603371 4774 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AL355974.1-201ENST00000618896 1708 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 MITF-203ENST00000328528 4680 ntTSL 5 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 TMSB4XP2-201ENST00000335179 210 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 Y_RNA.530-201ENST00000384587 101 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 SNORD37.1-201ENST00000390968 65 ntBASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms