Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 RPL36AP10-201ENST00000421785 322 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 ABCF2P2-201ENST00000450549 296 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 AL356863.1-201ENST00000623378 1080 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 CDRT1-208ENST00000630868 794 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 THAP12P5-201ENST00000405864 2275 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 OR11H4-201ENST00000315409 1082 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 AL672167.2-201ENST00000377164 879 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 RNU1-44P-201ENST00000384453 163 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 MIR554-201ENST00000384874 96 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 UBTFL3-201ENST00000418934 1024 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 RPL7P22-201ENST00000466005 733 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 SNRPCP3-201ENST00000474888 476 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 UBTFL6-201ENST00000477929 1024 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 DEFB109A-201ENST00000482450 265 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 AC002069.2-201ENST00000603580 883 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SCN11AQ9UI33 AC090220.1-201ENST00000593078 1699 ntBASIC5.51□□□□□ -1.53
SCN11AQ9UI33 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 RNU1-20P-201ENST00000363314 162 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 ENSAP1-201ENST00000392855 326 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC115285.1-201ENST00000424879 736 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC116667.1-201ENST00000604855 2072 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 RNA5SP175-201ENST00000364275 119 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AL356968.2-201ENST00000412769 1257 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 OR13Z1P-201ENST00000416141 834 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 RN7SL132P-201ENST00000478131 296 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC138832.1-201ENST00000522871 556 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC008966.2-201ENST00000606157 453 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 AC112484.5-201ENST00000624189 228 ntBASIC5.5□□□□□ -1.53
SCN11AQ9UI33 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN11AQ9UI33 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 ATP5F1P3-201ENST00000397213 657 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms