Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RN7SL812P-201ENST00000493791 279 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AC113430.1-201ENST00000506872 718 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 PHBP17-201ENST00000528576 541 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 MTND6P33-201ENST00000571794 183 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AC068790.7-201ENST00000602347 528 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AL161616.1-201ENST00000611867 286 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AC010809.3-201ENST00000621310 641 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.21□□□□□ -1.73
VPS29Q9UBQ0 DHX40P1-201ENST00000588725 1412 ntBASIC4.21□□□□□ -1.73
VPS29Q9UBQ0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
VPS29Q9UBQ0 AC105074.1-201ENST00000623380 3095 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 RN7SKP103-201ENST00000363848 320 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AL133270.1-201ENST00000402635 279 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 MIR1911-201ENST00000410783 80 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 SNRPFP1-201ENST00000414761 252 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 RPEP2-201ENST00000432149 701 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 MTND6P18-201ENST00000439477 513 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 HSPE1P22-201ENST00000456856 327 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AC053481.1-201ENST00000467217 306 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 PPBPP1-201ENST00000510807 373 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AF186190.1-201ENST00000517470 480 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 IGLV3-26-201ENST00000520756 302 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AP005119.2-201ENST00000579735 1105 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AP001160.4-201ENST00000596971 382 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AC079587.1-201ENST00000603846 277 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 LINC00901.1-201ENST00000617252 152 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AP001784.1-201ENST00000624107 428 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AC005332.5-201ENST00000591222 2919 ntBASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS29Q9UBQ0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AC107021.2-201ENST00000567714 2095 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AL589994.1-201ENST00000404962 340 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 RPL7AP25-201ENST00000423357 805 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AL132765.1-201ENST00000434165 553 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 PTMAP3-201ENST00000447474 330 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AL513533.1-201ENST00000453728 415 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 RN7SL354P-201ENST00000469282 294 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 ATP1B1P1-201ENST00000509767 915 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 RNU6-943P-201ENST00000516960 98 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 MTND2P17-201ENST00000550281 688 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AL352979.3-201ENST00000553515 247 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AC084783.1-201ENST00000565846 910 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AC007066.2-202ENST00000566531 914 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms