Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MIR1286-201ENST00000408112 78 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AL354766.1-201ENST00000423396 542 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 XKRYP1-201ENST00000423438 492 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AL158073.1-201ENST00000426848 1104 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 MTCO1P3-201ENST00000429327 192 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 XKRYP2-201ENST00000432915 492 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 RPL12P46-201ENST00000436610 195 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC004865.1-201ENST00000442276 1003 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 ELOCP13-201ENST00000443934 329 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 HMGB1P48-201ENST00000446155 598 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 RPL7P39-201ENST00000481157 744 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 RFPL4AP5-201ENST00000514977 504 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 Y_RNA.717-201ENST00000517106 92 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC022022.2-201ENST00000602989 360 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 IMMP1LP3-201ENST00000604197 224 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 HIRAP1-201ENST00000605318 787 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC109780.1-201ENST00000451768 1344 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 MTND4P10-201ENST00000446199 1363 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AL031119.1-201ENST00000404707 1879 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC090971.4-201ENST00000560291 1800 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 snoZ40.1-201ENST00000364540 72 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 RNU6-636P-201ENST00000384598 107 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 MIR513B-201ENST00000385136 84 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 PRRC2CP1-201ENST00000404428 159 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AL009179.1-201ENST00000406085 265 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 PCNPP4-201ENST00000414817 517 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 HIGD1AP15-201ENST00000416198 280 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AL354868.1-201ENST00000417077 482 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC019050.1-201ENST00000418508 492 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 OR2X1P-201ENST00000421144 687 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 RPL37P1-201ENST00000432310 284 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 TMEM183AP1-205ENST00000432739 290 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 CEACAMP1-201ENST00000434624 1035 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 CYCSP12-201ENST00000437729 300 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AL596266.1-201ENST00000448132 400 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC098826.2-201ENST00000452011 651 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC005410.1-202ENST00000460347 485 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 CCDC75P1-201ENST00000469247 791 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC005412.2-201ENST00000492004 341 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 RPL30P11-201ENST00000495304 339 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN1Q9P244 SEPT10P1-201ENST00000517342 1162 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN1Q9P244 OR4C2P-201ENST00000530855 1064 ntBASIC5.12□□□□□ -1.59
LRFN1Q9P244 OR4U1P-201ENST00000554958 912 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms