Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC023509.5-201ENST00000617434 807 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 AL121890.3-201ENST00000618494 516 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CISHQ9NSE2 DDX18P6-201ENST00000450119 1997 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CISHQ9NSE2 HCFC2P1-201ENST00000392864 1592 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 AL158163.1-201ENST00000603915 1649 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 AC104260.2-201ENST00000623551 3497 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CISHQ9NSE2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CISHQ9NSE2 OR4K17-201ENST00000315543 1032 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 VN1R8P-201ENST00000407739 893 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 FAR2P2-201ENST00000413041 594 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CISHQ9NSE2 RPL21P108-201ENST00000413857 481 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 PDSS1P1-201ENST00000422953 1114 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 EIF1P3-201ENST00000423841 334 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 FAR2P4-202ENST00000425399 584 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AL157831.1-201ENST00000426134 473 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 SKP1P3-201ENST00000429280 487 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AL512326.1-201ENST00000443050 721 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 AC010374.1-201ENST00000503762 1237 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AC093840.1-201ENST00000511599 336 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 FTH1P11-201ENST00000517577 551 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 PHBP17-201ENST00000528576 541 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AP001804.2-201ENST00000533932 910 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 AL109766.1-201ENST00000555080 552 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 AL451049.1-201ENST00000608672 497 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AL136295.6-201ENST00000610486 658 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AL445363.3-201ENST00000623080 671 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AC010435.1-201ENST00000623353 1177 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AP003497.2-201ENST00000624220 967 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 AC011944.2-201ENST00000624440 683 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 PCAT14-202ENST00000627127 3935 ntBASIC4.6□□□□□ -1.67
CISHQ9NSE2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CISHQ9NSE2 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CISHQ9NSE2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CISHQ9NSE2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CISHQ9NSE2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CISHQ9NSE2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CISHQ9NSE2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.59□□□□□ -1.67
CISHQ9NSE2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.59□□□□□ -1.67
CISHQ9NSE2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CISHQ9NSE2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CISHQ9NSE2 RNU1-15P-201ENST00000353977 144 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CISHQ9NSE2 RN7SKP97-201ENST00000410966 333 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 AL356968.2-201ENST00000412769 1257 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 AC011933.1-201ENST00000413334 321 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 MFSD13B-201ENST00000420133 1290 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CISHQ9NSE2 CEACAMP1-201ENST00000434624 1035 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 RPL12P18-201ENST00000437175 325 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.59□□□□□ -1.67
CISHQ9NSE2 AC116533.1-201ENST00000459748 321 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 RN7SL303P-201ENST00000469773 251 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 AC138409.2-202ENST00000507274 458 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 AC006064.5-201ENST00000541782 248 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.59□□□□□ -1.67
CISHQ9NSE2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.59□□□□□ -1.67
CISHQ9NSE2 AC119501.1-201ENST00000603646 475 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.59□□□□□ -1.67
CISHQ9NSE2 AL139254.3-201ENST00000641097 674 ntBASIC4.59□□□□□ -1.67
CISHQ9NSE2 AC105074.1-201ENST00000623380 3095 ntBASIC4.59□□□□□ -1.68
CISHQ9NSE2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CISHQ9NSE2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CISHQ9NSE2 VPS35P1-201ENST00000563400 1518 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CISHQ9NSE2 NR1H5P-201ENST00000452683 1377 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 RNA5SP28-201ENST00000363841 119 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 RNU1-132P-201ENST00000364300 164 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 TRAV35-201ENST00000390462 330 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 RNA5SP36-201ENST00000410197 133 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 RNU4-25P-201ENST00000410569 230 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 RPL23AP81-201ENST00000455252 467 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 RN7SL691P-201ENST00000494487 301 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms