Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SALL1Q9NSC2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SALL1Q9NSC2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SALL1Q9NSC2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.36□□□□□ -1.55
SALL1Q9NSC2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SALL1Q9NSC2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SALL1Q9NSC2 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.36□□□□□ -1.55
SALL1Q9NSC2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 MIR331-201ENST00000362302 94 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 RNU1-132P-201ENST00000364300 164 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 RPL23AP26-201ENST00000412728 464 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 ARAFP1-201ENST00000422172 605 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 AC004448.2-201ENST00000422360 586 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 PPIAP13-201ENST00000434706 478 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 UQCRHP4-201ENST00000471686 272 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 RN7SL41P-201ENST00000476144 297 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 AC008126.1-201ENST00000549019 480 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 BNIP3P5-201ENST00000562290 498 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 MIR1254-2-201ENST00000579553 63 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 HMGB2P1-201ENST00000591146 634 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 AP002360.3-201ENST00000607673 710 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 AC068724.3-201ENST00000625906 87 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 AC097063.1-201ENST00000426714 1797 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 AC008079.2-201ENST00000623543 20396 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 EOGT-210ENST00000615922 1931 ntBASIC5.35□□□□□ -1.55
SALL1Q9NSC2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SALL1Q9NSC2 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 RNU1-20P-201ENST00000363314 162 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 RN7SKP97-201ENST00000410966 333 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 SNRPFP1-201ENST00000414761 252 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AL161747.1-201ENST00000480068 358 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 RN7SL691P-201ENST00000494487 301 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 RNA5SP497-201ENST00000516081 97 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 CYCSP28-201ENST00000534284 321 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AC084033.1-201ENST00000550830 633 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AC025884.1-201ENST00000556034 378 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AC091178.1-203ENST00000584586 279 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AC010201.1-201ENST00000605051 540 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AC010857.1-201ENST00000606398 594 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AL353726.1-201ENST00000614041 1000 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AC022960.2-201ENST00000616300 666 ntBASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SALL1Q9NSC2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SALL1Q9NSC2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SALL1Q9NSC2 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.33□□□□□ -1.56
SALL1Q9NSC2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SALL1Q9NSC2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SALL1Q9NSC2 SNORA70C-201ENST00000384538 135 ntBASIC5.33□□□□□ -1.56
SALL1Q9NSC2 MIR195-201ENST00000385194 87 ntBASIC5.33□□□□□ -1.56
SALL1Q9NSC2 SNORA74C-2-201ENST00000411179 201 ntBASIC5.33□□□□□ -1.56
SALL1Q9NSC2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.33□□□□□ -1.56
SALL1Q9NSC2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SALL1Q9NSC2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.33□□□□□ -1.56
SALL1Q9NSC2 AC062016.2-201ENST00000420950 676 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms