Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSU72Q9NP77 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 RNU6-582P-201ENST00000362989 107 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 RNA5SP382-201ENST00000363355 112 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSU72Q9NP77 U3.52-201ENST00000384034 216 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 OR7E101P-201ENST00000400428 513 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 MIR1303-201ENST00000408625 86 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSU72Q9NP77 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSU72Q9NP77 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC009303.1-201ENST00000426307 352 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC083862.1-201ENST00000427378 1242 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AL513175.1-201ENST00000431492 780 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 RPL21P110-201ENST00000433345 446 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 RPS3AP38-201ENST00000435889 763 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 PPIAP17-201ENST00000438507 471 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC007677.1-201ENST00000445757 515 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AL121578.2-201ENST00000448797 447 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 ST13P21-201ENST00000453250 1098 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 TUBBP11-201ENST00000472255 252 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC073610.1-201ENST00000489971 396 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC114981.1-201ENST00000503897 678 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC117522.3-201ENST00000507974 584 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC093815.1-201ENST00000508637 280 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC114786.4-201ENST00000508771 728 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 SAP18P1-201ENST00000512058 390 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 snoU109.5-201ENST00000516231 132 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 RN7SKP196-201ENST00000516267 345 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 IGHV4-55-201ENST00000520889 368 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 MIR4637-201ENST00000582405 84 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC103792.1-201ENST00000603591 919 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC114477.1-201ENST00000605097 605 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 RNU6-88P-201ENST00000606801 100 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC103710.1-201ENST00000610003 901 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC008250.2-201ENST00000615261 205 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC068880.5-201ENST00000624331 290 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AC112487.2-201ENST00000637950 304 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSU72Q9NP77 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSU72Q9NP77 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AL136984.1-201ENST00000607611 1893 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 OR5BR1P-201ENST00000524992 1330 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 CDR1-202ENST00000625883 1485 ntBASIC6.21□□□□□ -1.42
SSU72Q9NP77 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSU72Q9NP77 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.21□□□□□ -1.42
SSU72Q9NP77 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSU72Q9NP77 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSU72Q9NP77 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSU72Q9NP77 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSU72Q9NP77 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSU72Q9NP77 SNORD35A-201ENST00000363389 86 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 RNA5SP140-201ENST00000364524 92 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 RNU4-7P-201ENST00000364758 141 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC025750.1-201ENST00000399891 379 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 CBX1P3-201ENST00000413296 527 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 C1DP2-201ENST00000418167 426 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC062016.2-201ENST00000420950 676 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 MTCO1P20-201ENST00000425366 358 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC008850.1-201ENST00000427546 362 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC013403.1-201ENST00000436954 263 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 TXNP5-201ENST00000441043 315 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 RPL31P44-201ENST00000447680 377 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 USP9YP12-201ENST00000450481 570 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms