Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 CKS1BP1-201ENST00000555221 240 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC008536.1-201ENST00000602872 669 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC090181.2-201ENST00000602975 672 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC103792.1-201ENST00000603591 919 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC100767.2-201ENST00000604840 693 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC007497.1-201ENST00000610421 561 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 CR589904.2-201ENST00000612533 440 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC099494.2-201ENST00000623371 978 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 RNA5SP183-201ENST00000362452 119 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 RNA5SP388-201ENST00000362584 119 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 UBE2V1P15-201ENST00000407776 448 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 RNA5SP306-201ENST00000411087 107 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 RPS3P2-201ENST00000421346 701 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 RPL7L1P1-201ENST00000448259 785 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 NPM1P39-201ENST00000449818 867 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 ISCUP1-201ENST00000454451 448 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 NDUFA5P5-201ENST00000468361 342 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC093770.1-201ENST00000511559 571 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 MTND2P7-201ENST00000521337 640 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 PHBP17-201ENST00000528576 541 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC005363.1-201ENST00000530779 351 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AL360157.1-201ENST00000565962 87 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 ADAD1P2-201ENST00000588476 646 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC133552.5-201ENST00000604266 540 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC073137.1-201ENST00000605636 634 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AL023583.1-201ENST00000607518 1143 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC109309.2-201ENST00000612597 332 ntBASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VIPAS39Q9H9C1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 MAPK10-304ENST00000641341 3984 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC017007.4-201ENST00000503353 1352 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC107021.2-201ENST00000567714 2095 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 RNU4-7P-201ENST00000364758 141 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 RN7SKP269-201ENST00000365545 319 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC104297.1-201ENST00000393779 870 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 RPL5P19-201ENST00000404228 893 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AL357078.2-201ENST00000416486 427 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 MTND4P15-201ENST00000437913 1033 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 HMGB3P22-202ENST00000451823 572 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC092647.2-201ENST00000452998 253 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC084754.1-201ENST00000463466 464 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC098799.3-201ENST00000506095 438 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC017037.1-201ENST00000508460 471 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 NDUFA5P11-201ENST00000567995 343 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC022726.1-201ENST00000587475 207 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AL627230.1-201ENST00000613077 211 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 AL359715.5-201ENST00000623431 443 ntBASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VIPAS39Q9H9C1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms