Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 NDUFB4P11-201ENST00000560510 395 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 BGLT3-201ENST00000564523 994 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM4Q9C037 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM4Q9C037 AC007390.2-201ENST00000606229 3803 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM4Q9C037 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM4Q9C037 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM4Q9C037 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM4Q9C037 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM4Q9C037 NXF4-202ENST00000416098 1465 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AL122126.1-201ENST00000546905 1318 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM4Q9C037 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM4Q9C037 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM4Q9C037 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 U3.22-201ENST00000391120 215 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 LRRC37BP1-201ENST00000398851 714 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC234779.1-201ENST00000425910 285 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 RPL34P20-201ENST00000442771 351 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 OR52J1P-201ENST00000450596 932 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 AL162388.1-201ENST00000450912 352 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 HMGB1P4-201ENST00000455362 567 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 RN7SL443P-201ENST00000464331 290 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 PPIAP21-201ENST00000464473 501 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 RNA5SP392-201ENST00000516905 112 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 RN7SKP92-201ENST00000517266 244 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC084824.1-201ENST00000550917 1005 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 AL109766.1-201ENST00000555080 552 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 MEMO1P5-201ENST00000604810 406 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC004232.3-201ENST00000622977 525 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC008785.1-201ENST00000624475 456 ntBASIC4.74□□□□□ -1.65
TRIM4Q9C037 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM4Q9C037 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM4Q9C037 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM4Q9C037 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM4Q9C037 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM4Q9C037 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM4Q9C037 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM4Q9C037 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM4Q9C037 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM4Q9C037 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM4Q9C037 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 SNORA11F-201ENST00000408237 128 ntBASIC4.73□□□□□ -1.65
TRIM4Q9C037 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM4Q9C037 RNA5SP104-201ENST00000410989 118 ntBASIC4.73□□□□□ -1.65
TRIM4Q9C037 RAC1P3-201ENST00000416129 580 ntBASIC4.73□□□□□ -1.65
TRIM4Q9C037 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 AL357520.1-201ENST00000441557 453 ntBASIC4.73□□□□□ -1.65
TRIM4Q9C037 KNOP1P3-201ENST00000446933 426 ntBASIC4.73□□□□□ -1.65
TRIM4Q9C037 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 GCSHP4-201ENST00000538792 439 ntBASIC4.73□□□□□ -1.65
TRIM4Q9C037 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 MTND6P33-201ENST00000571794 183 ntBASIC4.73□□□□□ -1.65
TRIM4Q9C037 MIR3160-1-201ENST00000577972 85 ntBASIC4.73□□□□□ -1.65
TRIM4Q9C037 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 AC068790.5-201ENST00000602741 355 ntBASIC4.73□□□□□ -1.65
TRIM4Q9C037 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM4Q9C037 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM4Q9C037 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM4Q9C037 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM4Q9C037 AC068446.1-201ENST00000556425 1549 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM4Q9C037 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM4Q9C037 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM4Q9C037 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM4Q9C037 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRIM4Q9C037 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM4Q9C037 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms