Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AL158151.2-201ENST00000434250 241 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TAC4-205ENST00000436235 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC092628.1-201ENST00000436250 252 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PPIAP10-201ENST00000438675 458 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 GPATCH4-203ENST00000438976 1159 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC006970.1-201ENST00000442064 389 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL049564.1-201ENST00000449099 825 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC108448.1-201ENST00000455154 293 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL100P-201ENST00000460565 293 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL567P-201ENST00000462015 303 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC025062.1-201ENST00000465163 644 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC022034.3-201ENST00000471393 478 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AP000893.1-201ENST00000474462 794 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL442663.1-201ENST00000478589 364 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RPS14P8-201ENST00000478778 369 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL7AP11-201ENST00000486538 799 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL813P-201ENST00000489529 283 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AP003551.1-201ENST00000495884 574 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC231760.1-201ENST00000498002 260 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL23AP55-201ENST00000498163 452 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02221-201ENST00000508097 499 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC083841.2-201ENST00000510610 602 ntTSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TRMT112P5-201ENST00000511173 334 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORA31.7-201ENST00000516287 135 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-966P-201ENST00000516479 104 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-197P-201ENST00000516680 100 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-557P-201ENST00000516842 110 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP230-201ENST00000517039 122 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-1183P-201ENST00000517054 60 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 IGKV2D-38-201ENST00000518423 240 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 GOT1L1-202ENST00000518826 497 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC136628.3-201ENST00000521868 290 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC109635.2-201ENST00000525654 524 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC067930.2-201ENST00000529247 431 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CCND2P1-201ENST00000539268 799 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SNHG14-211ENST00000547292 626 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC131157.1-201ENST00000547902 722 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC025575.2-201ENST00000549357 565 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR202HG-202ENST00000553459 674 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL160236.1-201ENST00000556317 195 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL136018.1-201ENST00000557736 636 ntTSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PEX11A-203ENST00000559170 905 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SULT1C2P1-202ENST00000562418 459 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC116348.3-201ENST00000569459 699 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC104984.4-201ENST00000577420 224 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL498P-201ENST00000583650 298 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL411P-201ENST00000585204 300 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC007795.1-201ENST00000585883 437 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL353997.4-201ENST00000586196 166 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF814-212ENST00000597807 771 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC063977.1-201ENST00000600623 371 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC018809.1-201ENST00000602411 553 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL137843.1-201ENST00000605078 385 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL356052.1-201ENST00000605764 376 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TUSC8-202ENST00000607312 628 ntTSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC025287.3-201ENST00000611726 501 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL591926.2-201ENST00000611780 500 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 Metazoa_SRP.92-201ENST00000613789 329 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TUG1_2.1-201ENST00000614234 87 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL121890.4-201ENST00000616569 609 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR7848-201ENST00000617402 101 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC092634.7-201ENST00000621022 103 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC092745.3-201ENST00000622868 216 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC132154.1-201ENST00000623248 2134 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC027309.3-201ENST00000623419 351 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 GLOD4-218ENST00000625892 111 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 GLOD4-219ENST00000628529 111 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORA43.4-201ENST00000629559 138 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TTC38-207ENST00000629918 162 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF391-201ENST00000244576 4079 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LRRC15-202ENST00000428839 3248 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC104162.1-201ENST00000430831 2382 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TTI2-202ENST00000431156 2363 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms