Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 MIR142-201ENST00000384835 87 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC092642.1-201ENST00000392417 425 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AL356057.1-202ENST00000402263 756 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 RN7SKP229-201ENST00000410465 302 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 LINC00993-201ENST00000420453 540 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC004938.1-201ENST00000438468 308 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 RPS15AP29-201ENST00000445539 400 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 SLC25A18P1-201ENST00000449385 454 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AL445433.1-201ENST00000457507 257 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC008953.1-201ENST00000497334 318 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 GAPDHP56-201ENST00000506031 988 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 BUD31P1-201ENST00000521828 359 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC004923.2-201ENST00000529649 369 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AP002812.4-201ENST00000532139 286 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 SETP1-201ENST00000556014 845 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AL049839.1-201ENST00000556151 657 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC084757.1-201ENST00000559987 490 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC011453.2-201ENST00000603737 729 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AL008729.2-201ENST00000606393 473 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC092574.1-201ENST00000609771 420 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 CR392039.4-201ENST00000624968 501 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 HPVC1-201ENST00000629899 1198 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 CASC19-222ENST00000641321 1173 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 OR2L1P-202ENST00000641567 1023 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 AC126323.6-202ENST00000568092 3511 ntBASIC4.75□□□□□ -1.65
PDLIM5Q96HC4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC026523.2-201ENST00000625039 7739 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 RN7SKP95-201ENST00000362860 303 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 RNU4-4P-201ENST00000364588 130 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 SNORA40.4-201ENST00000390971 128 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC114755.2-201ENST00000413520 361 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 MTND4P11-201ENST00000417020 1058 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC093162.1-201ENST00000419682 124 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 E2F6P2-201ENST00000420708 748 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AL645608.4-201ENST00000423619 154 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 FAR1P1-201ENST00000427163 934 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 RPS17P8-201ENST00000434525 335 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC093414.1-201ENST00000434712 514 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 OTX2P1-201ENST00000450956 354 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 OR52A4P-201ENST00000472867 958 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC073358.1-201ENST00000505671 684 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 RN7SKP46-201ENST00000515942 234 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC233266.2-201ENST00000567067 528 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 MIR4512-201ENST00000583257 77 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC020910.3-201ENST00000603701 874 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AL512624.1-201ENST00000613638 469 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AL356094.1-201ENST00000624663 1212 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 CASC19-204ENST00000641001 2055 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 TLK1P1-201ENST00000456760 2440 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AL049555.1-201ENST00000562834 1933 ntBASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM5Q96HC4 AC021242.1-201ENST00000507315 2035 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 Z95327.2-201ENST00000414579 1873 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms