Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 RPL12P28-201ENST00000430852 489 ntBASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 RPL23AP43-201ENST00000446445 471 ntBASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 RPL10P17-201ENST00000453852 316 ntBASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 RN7SKP46-201ENST00000515942 234 ntBASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 RNA5SP446-201ENST00000515955 82 ntBASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AC068831.4-201ENST00000556118 109 ntBASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 MTND2P13-201ENST00000577438 1039 ntBASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AC010615.3-201ENST00000597319 394 ntBASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AC133552.5-201ENST00000604266 540 ntBASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC123912.3-201ENST00000600907 1367 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 RN7SKP216-201ENST00000411050 312 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 RPL21P91-201ENST00000429231 479 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 OR6C71P-201ENST00000432580 913 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 TXNP2-201ENST00000443918 295 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 TPT1P13-201ENST00000449760 499 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC022431.1-201ENST00000450941 438 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 MTCYBP14-201ENST00000457471 715 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC112206.1-201ENST00000468416 477 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC006463.2-201ENST00000473326 348 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC113398.2-201ENST00000507630 558 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 OR8G5-201ENST00000524943 1041 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC011270.1-201ENST00000558606 583 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 HMGB2P1-201ENST00000591146 634 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC090181.2-201ENST00000602975 672 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC005229.3-201ENST00000603438 323 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC005191.1-201ENST00000603950 358 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AP005212.4-201ENST00000614206 710 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 MIR6891-201ENST00000618788 93 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AP005019.3-201ENST00000620418 560 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC010435.1-201ENST00000623353 1177 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 AC126323.6-202ENST00000568092 3511 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 Z95327.2-201ENST00000414579 1873 ntBASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ECHDC3Q96DC8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AL450326.2-201ENST00000421913 1962 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 VPS35P1-201ENST00000563400 1518 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 OR52B1P-201ENST00000316506 909 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 RNA5SP443-201ENST00000363083 132 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 RPL23AP59-201ENST00000399415 461 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 FCF1P5-201ENST00000406490 482 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 RAB9AP4-201ENST00000415230 609 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AL356387.2-201ENST00000422272 243 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 DNAJC19P7-201ENST00000428811 344 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC053481.1-201ENST00000467217 306 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 RN7SL809P-201ENST00000482040 297 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC025674.1-201ENST00000507074 324 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 snoU109.6-201ENST00000516831 118 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms