Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC068533.1-201ENST00000418542 415 ntBASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 AC092651.1-201ENST00000426110 312 ntBASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 RPL23AP52-201ENST00000439311 478 ntBASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 RPS29P7-201ENST00000439662 171 ntBASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 AC007688.1-201ENST00000475592 759 ntBASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 AP001267.4-201ENST00000602598 545 ntBASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 RNU4-89P-201ENST00000607443 133 ntBASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 AL021997.2-201ENST00000615674 271 ntBASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC168Q8NDH2 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 AC092681.1-201ENST00000297369 291 ntBASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 RNU1-132P-201ENST00000364300 164 ntBASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 SNORA73.2-201ENST00000364946 201 ntBASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 AL158827.1-201ENST00000416300 391 ntBASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 ISCUP1-201ENST00000454451 448 ntBASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 PRELID3BP6-201ENST00000503839 571 ntBASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 SNORA70.24-201ENST00000517233 118 ntBASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 AC027369.5-201ENST00000533838 755 ntBASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 TRAV8-5-201ENST00000537369 341 ntBASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 AC023762.1-201ENST00000603280 584 ntBASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
CCDC168Q8NDH2 LINC00622-201ENST00000562811 1570 ntBASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 AP000907.1-201ENST00000428428 510 ntBASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 RN7SKP248-201ENST00000516278 305 ntBASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 MIR5195-201ENST00000583555 115 ntBASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 AL161729.3-201ENST00000603533 673 ntBASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 AL672167.1-203ENST00000641299 2975 ntBASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 AL591135.1-201ENST00000401578 5914 ntBASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 AC007382.1-201ENST00000624376 2618 ntBASIC3.71□□□□□ -1.82
CCDC168Q8NDH2 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 SNORA5A-201ENST00000384111 134 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 MIR34B-201ENST00000385076 84 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 RN7SKP159-201ENST00000410657 292 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 PRPF19P1-201ENST00000584766 898 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 AL445363.3-201ENST00000623080 671 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 AC116096.1-201ENST00000566804 2314 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 RNA5SP246-201ENST00000458909 119 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 RPL7P9-201ENST00000468715 747 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 BNIP3P10-201ENST00000605360 577 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 AC015967.1-201ENST00000619893 476 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 AC009093.8-201ENST00000641769 292 ntBASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CCDC168Q8NDH2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms