Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC010424.2-201ENST00000607594 443 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC145207.9-201ENST00000623802 325 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC091948.2-201ENST00000636510 279 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 IRF5P1-201ENST00000504852 2164 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC007382.1-201ENST00000624376 2618 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC132825.1-201ENST00000463573 2247 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RNU4-39P-201ENST00000362455 127 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RNU6-883P-201ENST00000384597 107 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RN7SKP293-201ENST00000411389 296 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 EIF4EP1-201ENST00000422311 642 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 CR848007.2-201ENST00000424918 787 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AL691517.1-201ENST00000440833 1235 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AL137845.2-201ENST00000444292 988 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 HMGN1P2-201ENST00000445197 310 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AL500527.1-201ENST00000448532 255 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RPS27AP2-201ENST00000457576 465 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC096741.1-201ENST00000472250 846 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 HMGN2P25-201ENST00000486956 268 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RNU2-30P-201ENST00000516209 141 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RNA5SP473-201ENST00000516402 125 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RNA5SP43-201ENST00000516559 110 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RNA5SP392-201ENST00000516905 112 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 HMGB1P46-201ENST00000520062 610 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC090281.1-201ENST00000523019 276 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 SMARCE1P4-201ENST00000523647 241 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 OR4A46P-201ENST00000527255 933 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 FKBP1BP1-201ENST00000553366 325 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AL731537.2-201ENST00000561565 951 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 RNA5SP440-201ENST00000612665 119 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC026368.1-201ENST00000614934 690 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC127024.6-201ENST00000621598 424 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC000123.2-201ENST00000623124 461 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC136428.4-201ENST00000634254 1155 ntBASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC71LQ8N9Z2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC009951.1-201ENST00000623674 2614 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 TMSB4XP4-201ENST00000323496 618 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 RNU1-108P-201ENST00000362556 161 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 RNU6-532P-201ENST00000384318 107 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 ARL4AP5-201ENST00000404372 599 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 RN7SKP222-201ENST00000410651 315 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 DPPA2P3-201ENST00000411853 655 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms