Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL360085.1-201ENST00000604713 532 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC105429.2-201ENST00000610567 517 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC005858.4-201ENST00000623191 700 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 CDY7P-201ENST00000429883 1604 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC034229.2-201ENST00000566945 2508 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AP000547.3-204ENST00000588548 2523 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC105074.1-201ENST00000623380 3095 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC114546.3-201ENST00000623582 1734 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 RNA5SP389-201ENST00000362610 115 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 RNA5SP226-201ENST00000362653 115 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AL136116.1-201ENST00000403591 381 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AL356967.1-201ENST00000406305 431 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 SOD1P1-201ENST00000407803 440 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 MTND3P8-201ENST00000412909 339 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC009413.1-201ENST00000414823 399 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC096632.1-201ENST00000427395 310 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 OR4F13P-201ENST00000428478 931 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 YWHAZP8-201ENST00000436935 731 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC007000.1-201ENST00000453064 794 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 RNU6-1218P-201ENST00000458990 108 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC103851.1-201ENST00000506833 274 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC146944.3-201ENST00000509969 371 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC018797.3-201ENST00000513388 1241 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC107934.1-201ENST00000522215 217 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 OR4R1P-201ENST00000529879 463 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC011611.6-201ENST00000547483 255 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 OR4T1P-201ENST00000554933 911 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 PSMA3P-201ENST00000555485 635 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 RPL23AP92-201ENST00000603609 255 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AL390058.1-201ENST00000603834 629 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC139493.1-201ENST00000604368 397 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AC233280.20-201ENST00000637412 416 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 WNK1-220ENST00000574564 1401 ntBASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DEPDC4Q8N2C3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms