Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC087481.2-201ENST00000565492 330 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 ZNF322P1-201ENST00000568013 1209 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 EIF1P6-201ENST00000600054 334 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC126118.1-201ENST00000607744 628 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AL121873.1-201ENST00000616013 524 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC016717.3-201ENST00000624730 554 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 LINC01739-205ENST00000641890 573 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC099063.3-201ENST00000642066 185 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC140134.1-201ENST00000511830 3544 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 WDR95P-201ENST00000425638 1542 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC092070.2-203ENST00000598377 3644 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC090220.1-201ENST00000593078 1699 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC083843.2-201ENST00000568248 6253 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 SELENOWP1-201ENST00000322792 252 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-1283P-201ENST00000365314 105 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-1320P-201ENST00000390838 107 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-1269P-201ENST00000391139 107 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 MIR1203-201ENST00000408812 85 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RNA5SP498-201ENST00000411342 120 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RPL35AP3-201ENST00000414680 288 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC099677.3-201ENST00000427081 395 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC016027.5-201ENST00000427227 210 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AP001324.1-201ENST00000428553 399 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AL050321.1-201ENST00000432363 400 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 TMX2P1-201ENST00000436507 708 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 PCBP2P1-201ENST00000437262 977 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 GEMIN2P1-201ENST00000454246 752 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC027673.1-201ENST00000456245 405 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 ACA64.4-201ENST00000459070 127 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-599P-201ENST00000459383 107 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-1193P-201ENST00000459461 107 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RPS4XP12-201ENST00000461747 709 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RN7SL57P-201ENST00000493687 290 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC096751.1-202ENST00000502691 1067 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 BNIP3P41-201ENST00000503774 571 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 GTF2IP8-201ENST00000560687 584 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC119403.2-201ENST00000590960 598 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 MIR132-201ENST00000591554 101 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC091805.2-201ENST00000603848 235 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC106028.5-201ENST00000610332 395 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AL353726.1-201ENST00000614041 1000 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 U6.42-201ENST00000618440 107 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-368P-201ENST00000620928 107 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms