Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC01808-202ENST00000641680 1116 ntBASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 MAPK10-349ENST00000641767 3661 ntBASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 CUL4AP1-201ENST00000514750 1863 ntBASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDKL3Q8IVW4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 HCFC2P1-201ENST00000392864 1592 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 RNA5SP307-201ENST00000362863 116 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 RNA5SP397-201ENST00000391323 118 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 IPMKP1-201ENST00000425988 855 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 RPL12P3-201ENST00000440080 396 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 PSMC1P13-201ENST00000458195 985 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 RPL5P30-201ENST00000465511 891 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 CCDC75P1-201ENST00000469247 791 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 AC083982.1-201ENST00000485679 344 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 STMN1P2-201ENST00000508435 439 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 RNA5SP497-201ENST00000516081 97 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 AL121839.1-201ENST00000556233 1185 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 OR7M1P-201ENST00000608946 533 ntBASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDKL3Q8IVW4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 RPS24P12-201ENST00000402084 394 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 RNA5SP146-201ENST00000410743 123 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 RN7SKP106-201ENST00000410832 272 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AL049745.1-201ENST00000433953 286 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AL138787.1-202ENST00000437804 898 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC022795.1-201ENST00000473808 480 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 NDUFB4P12-201ENST00000513465 390 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC008694.2-201ENST00000517591 306 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AL138721.1-201ENST00000616756 179 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC023509.5-201ENST00000617434 807 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms