Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AC004074.1-201ENST00000421810 1063 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 NRBF2P3-201ENST00000432731 865 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 PSMD10P3-201ENST00000437000 448 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AL935212.3-201ENST00000450729 284 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AC104763.1-201ENST00000475274 360 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 NPM1P52-201ENST00000518264 846 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 HMGB2P1-201ENST00000591146 634 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AL158062.1-201ENST00000619632 745 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AC103858.2-201ENST00000621471 543 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC108467.2-201ENST00000617640 1597 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 RNU6-697P-201ENST00000363348 107 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 RN7SKP278-201ENST00000410504 342 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC140479.3-201ENST00000418944 1126 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 GAPDHP49-201ENST00000421421 961 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC106901.1-201ENST00000425086 698 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 IPMKP1-201ENST00000425988 855 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 RPL21P91-201ENST00000429231 479 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 OR7L1P-201ENST00000456181 380 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC107015.1-201ENST00000466902 747 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC105918.1-201ENST00000474399 838 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 HNRNPKP5-201ENST00000515300 253 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 RN7SKP276-201ENST00000516242 268 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC008694.2-201ENST00000517591 306 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 OR5AZ1P-201ENST00000527448 943 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC009117.1-201ENST00000563948 554 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 BGLT3-201ENST00000564523 994 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC122134.1-201ENST00000565664 1104 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 MIR3667-201ENST00000581025 74 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AL031320.1-201ENST00000604177 357 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC087385.3-201ENST00000620477 187 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AL355480.1-201ENST00000629041 99 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 CR788268.1-201ENST00000603931 1809 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AC135352.1-201ENST00000506173 1418 ntBASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC50Q8IVM0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 SNORA74A-201ENST00000364089 198 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 SNORA71.2-201ENST00000364941 134 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 OR13C3-201ENST00000374781 1108 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 RPL23AP25-201ENST00000430973 463 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 MAPRE1P3-201ENST00000435438 796 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 PTMAP6-201ENST00000439110 327 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 MTND6P18-201ENST00000439477 513 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 PTMAP3-201ENST00000447474 330 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 AC108463.1-201ENST00000450258 347 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 RPL7P16-201ENST00000479738 738 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 AC004453.1-201ENST00000487895 408 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 RPL36AP41-201ENST00000493820 306 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms