Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 PCAT14-202ENST00000627127 3935 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 RN7SKP104-201ENST00000362605 328 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 RNU6-252P-201ENST00000363232 107 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 RN7SKP113-201ENST00000363891 295 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AP000357.1-201ENST00000409926 1165 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AC013429.2-201ENST00000418798 781 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 NPM1P24-201ENST00000428039 894 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 PPIAP13-201ENST00000434706 478 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 MED6P1-201ENST00000439659 713 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 RPS3AP53-201ENST00000454716 778 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 RPL7P16-201ENST00000479738 738 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 RN7SL441P-201ENST00000492388 296 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AC027338.1-201ENST00000514840 825 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 OR7E128P-201ENST00000532736 1024 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 POLR2KP1-201ENST00000553226 168 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AC018552.3-201ENST00000567416 561 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AC005034.4-201ENST00000603612 899 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AC079880.2-201ENST00000603790 1213 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 FAM25E-202ENST00000608562 189 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 AC091953.3-201ENST00000623220 236 ntBASIC5.14□□□□□ -1.59
PRPF39Q86UA1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.14□□□□□ -1.59
PRPF39Q86UA1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AL512430.2-201ENST00000406786 339 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 SNORA77-201ENST00000408716 125 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 GSTM3P2-201ENST00000412746 530 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 COX6B1P1-201ENST00000415962 213 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 FTH1P16-201ENST00000435241 552 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 RPL34P20-201ENST00000442771 351 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 RNFT1P2-201ENST00000443064 757 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 Z80107.2-201ENST00000445127 392 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 RPL7L1P1-201ENST00000448259 785 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC091180.1-201ENST00000462104 372 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 SMARCE1P4-201ENST00000523647 241 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AP002812.4-201ENST00000532139 286 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AGGF1P9-201ENST00000561884 913 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC093510.2-201ENST00000562820 896 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC105254.2-201ENST00000603636 436 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 MIR6748-201ENST00000610433 71 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AL627230.1-201ENST00000613077 211 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AL591926.8-201ENST00000616876 211 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 U6.48-201ENST00000618523 106 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC015871.5-202ENST00000623252 701 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC112694.2-201ENST00000623697 768 ntBASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms