Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC245036.5-201ENST00000596330 847 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AL035411.2-201ENST00000604022 421 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC025811.1-201ENST00000604312 472 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC002487.1-201ENST00000604565 994 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 STMN1P1-201ENST00000617809 440 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC010975.3-201ENST00000618727 978 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 Z99129.2-201ENST00000619967 314 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AP000648.2-201ENST00000624182 404 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 U6.107-201ENST00000637108 79 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 SCARNA15-201ENST00000607520 4325 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 SEC63P2-201ENST00000503863 1939 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC073055.1-201ENST00000456901 1621 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC091305.2-201ENST00000624049 1576 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 RNU4-51P-201ENST00000364206 140 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 RNU4-68P-201ENST00000364314 141 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 RNU6-224P-201ENST00000384055 107 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 RNU6-98P-201ENST00000384173 107 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 MIR105-1-201ENST00000385222 81 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 RNU6-1242P-201ENST00000391052 103 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 MTCO1P56-201ENST00000401674 224 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 LYPLA1P3-201ENST00000402650 695 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AL390316.1-201ENST00000406279 553 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 RPL22P18-201ENST00000417197 377 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 BMS1P13-201ENST00000417301 885 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 RPS3AP37-201ENST00000419176 745 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 RPS3P2-201ENST00000421346 701 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 RPL12P28-201ENST00000430852 489 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 RPL7P29-201ENST00000437151 728 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 SUMO2P3-201ENST00000438311 288 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 OR2AF1P-201ENST00000454899 889 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 CDC42P1-201ENST00000456658 548 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC096992.1-201ENST00000459808 709 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC096741.1-201ENST00000472250 846 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 BOLA3P3-201ENST00000505182 232 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 HMGB1P40-201ENST00000525121 540 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC011840.5-201ENST00000582125 771 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC125494.3-201ENST00000602759 455 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AL499605.1-201ENST00000604628 403 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 AC090525.3-201ENST00000605601 189 ntBASIC4.66□□□□□ -1.66
SHFQ7M4L6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms