Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ARL2BPP10-201ENST00000446487 531 ntBASIC5.51□□□□□ -1.53
CTR9Q6PD62 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTR9Q6PD62 OR6C72P-201ENST00000451403 892 ntBASIC5.51□□□□□ -1.53
CTR9Q6PD62 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 snoU13.1-201ENST00000459157 104 ntBASIC5.51□□□□□ -1.53
CTR9Q6PD62 AC104763.1-201ENST00000475274 360 ntBASIC5.51□□□□□ -1.53
CTR9Q6PD62 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTR9Q6PD62 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 STMN1P2-201ENST00000508435 439 ntBASIC5.51□□□□□ -1.53
CTR9Q6PD62 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 AC018442.3-201ENST00000523025 183 ntBASIC5.51□□□□□ -1.53
CTR9Q6PD62 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTR9Q6PD62 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 MIR4715-201ENST00000584117 79 ntBASIC5.51□□□□□ -1.53
CTR9Q6PD62 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 VN1R81P-201ENST00000602085 372 ntBASIC5.51□□□□□ -1.53
CTR9Q6PD62 AC093765.1-201ENST00000603758 881 ntBASIC5.51□□□□□ -1.53
CTR9Q6PD62 AL133338.2-201ENST00000604292 736 ntBASIC5.51□□□□□ -1.53
CTR9Q6PD62 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTR9Q6PD62 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTR9Q6PD62 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTR9Q6PD62 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CTR9Q6PD62 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTR9Q6PD62 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 AL592148.3-201ENST00000608771 2646 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 AC135352.1-201ENST00000506173 1418 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTR9Q6PD62 DHX9P1-201ENST00000436565 3076 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTR9Q6PD62 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CTR9Q6PD62 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTR9Q6PD62 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 AC010132.2-201ENST00000295493 1043 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 AC126755.2-208ENST00000327792 462 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 AC138969.1-213ENST00000331436 462 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTR9Q6PD62 MIR659-201ENST00000384963 97 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 MIR129-1-201ENST00000384972 72 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 MTATP6P19-201ENST00000413797 659 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 SNRPFP2-201ENST00000440710 251 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 ARL4AP3-201ENST00000441452 574 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 CYCSP42-201ENST00000450823 238 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 AC098583.1-201ENST00000480875 255 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 AGGF1P3-201ENST00000493675 1213 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 MIR5096-201ENST00000583713 70 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 GMCL1P2-201ENST00000605230 823 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 AC019193.2-201ENST00000610012 634 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 AC010435.1-201ENST00000623353 1177 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 AL049536.1-201ENST00000625043 744 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CTR9Q6PD62 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTR9Q6PD62 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTR9Q6PD62 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 KPNA2P2-201ENST00000419546 1489 ntBASIC5.5□□□□□ -1.53
CTR9Q6PD62 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTR9Q6PD62 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CTR9Q6PD62 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.49□□□□□ -1.53
CTR9Q6PD62 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CTR9Q6PD62 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.49□□□□□ -1.53
CTR9Q6PD62 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTR9Q6PD62 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTR9Q6PD62 AC139713.2-215ENST00000641428 5037 ntBASIC5.49□□□□□ -1.53
CTR9Q6PD62 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTR9Q6PD62 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTR9Q6PD62 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CTR9Q6PD62 RNU6-729P-201ENST00000384399 107 ntBASIC5.49□□□□□ -1.53
CTR9Q6PD62 AL356968.2-201ENST00000412769 1257 ntBASIC5.49□□□□□ -1.53
CTR9Q6PD62 UQCRBP1-201ENST00000421129 336 ntBASIC5.49□□□□□ -1.53
CTR9Q6PD62 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.49□□□□□ -1.53
CTR9Q6PD62 DNAJC19P7-201ENST00000428811 344 ntBASIC5.49□□□□□ -1.53
CTR9Q6PD62 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CTR9Q6PD62 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.49□□□□□ -1.53
CTR9Q6PD62 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.49□□□□□ -1.53
CTR9Q6PD62 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.49□□□□□ -1.53
CTR9Q6PD62 AC104849.1-201ENST00000462623 405 ntBASIC5.49□□□□□ -1.53
CTR9Q6PD62 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.49□□□□□ -1.53
CTR9Q6PD62 AC002456.2-201ENST00000509356 380 ntBASIC5.49□□□□□ -1.53
CTR9Q6PD62 OR51K1P-201ENST00000510214 950 ntBASIC5.49□□□□□ -1.53
CTR9Q6PD62 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.49□□□□□ -1.53
CTR9Q6PD62 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms